Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
TNRLELSGIICRTPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIISGHENQA
ITHSITVGSAVTVRGFISCHKALSKMVLHAEQIELID

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4apv-a1-m2-cA 97 97 1.0000 1.0000 1.0000 2.46e-68 4apv-a1-m1-cA_4apv-a1-m2-cA
2 4apv-a1-m1-cA 97 97 1.0000 1.0000 1.0000 2.46e-68 4apv-a1-m1-cA_4apv-a1-m2-cA
3 1woc-a1-m1-cD 97 98 0.8557 0.8557 0.8469 8.82e-55 1woc-a1-m1-cB_1woc-a1-m1-cD
4 1woc-a1-m1-cB 97 98 0.8557 0.8557 0.8469 8.82e-55 1woc-a1-m1-cB_1woc-a1-m1-cD
5 1txy-a1-m1-cA 89 96 0.8247 0.8989 0.8333 2.02e-51 1txy-a1-m1-cB_1txy-a1-m1-cA
6 1txy-a1-m1-cB 81 94 0.7526 0.9012 0.7766 3.80e-44 1txy-a1-m1-cB_1txy-a1-m1-cA
7 3k8a-a1-m1-cA 100 86 0.2784 0.2700 0.3140 7.16e-05 3k8a-a1-m1-cA_3k8a-a1-m1-cB
8 3k8a-a1-m1-cB 103 86 0.2784 0.2621 0.3140 8.54e-05 3k8a-a1-m1-cA_3k8a-a1-m1-cB
9 4jxk-a1-m1-cB 327 59 0.1546 0.0459 0.2542 6.8 4jxk-a1-m1-cA_4jxk-a1-m1-cB
10 4jxk-a1-m1-cA 327 59 0.1546 0.0459 0.2542 6.8 4jxk-a1-m1-cA_4jxk-a1-m1-cB
11 4cs8-a1-m1-cB 164 34 0.1134 0.0671 0.3235 8.0 4cs8-a1-m1-cA_4cs8-a1-m1-cB
12 7lm0-a1-m1-cB 446 15 0.1031 0.0224 0.6667 8.3 7lm0-a1-m1-cB_7lm0-a1-m1-cA
13 7lm0-a1-m1-cA 449 15 0.1031 0.0223 0.6667 8.3 7lm0-a1-m1-cB_7lm0-a1-m1-cA
14 4cs7-a1-m1-cC 172 34 0.1134 0.0640 0.3235 8.4 4cs7-a1-m1-cE_4cs7-a1-m1-cC
15 4cs7-a1-m1-cB 166 34 0.1134 0.0663 0.3235 8.5 4cs7-a1-m1-cB_4cs7-a1-m1-cE
16 5xgt-a1-m1-cA 104 29 0.1031 0.0962 0.3448 8.6 5xgt-a1-m1-cA_5xgt-a1-m1-cB
17 4cs7-a1-m1-cE 168 34 0.1134 0.0655 0.3235 8.8 4cs7-a1-m1-cB_4cs7-a1-m1-cE, 4cs7-a1-m1-cE_4cs7-a1-m1-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600