Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=81)
TNRLVLSGTVCRAPLRKPHCQFVLEHRSVQEEAGFHRQAWCQPVIVSGHENQAITHSITV
GSRITVQGFISCHVLHAEQIE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1txy-a1-m1-cB 81 81 1.0000 1.0000 1.0000 2.32e-55 1txy-a1-m1-cB_1txy-a1-m1-cA
2 1txy-a1-m1-cA 89 87 0.9877 0.8989 0.9195 7.01e-52 1txy-a1-m1-cB_1txy-a1-m1-cA
3 1woc-a1-m1-cD 97 95 1.0000 0.8351 0.8526 3.13e-50 1woc-a1-m1-cB_1woc-a1-m1-cD
4 1woc-a1-m1-cB 97 95 1.0000 0.8351 0.8526 3.13e-50 1woc-a1-m1-cB_1woc-a1-m1-cD
5 4apv-a1-m2-cA 97 94 0.9012 0.7526 0.7766 3.17e-44 4apv-a1-m1-cA_4apv-a1-m2-cA
6 4apv-a1-m1-cA 97 94 0.9012 0.7526 0.7766 3.17e-44 4apv-a1-m1-cA_4apv-a1-m2-cA
7 4aib-a2-m1-cD 325 41 0.1235 0.0308 0.2439 1.3 4aib-a2-m1-cC_4aib-a2-m1-cD
8 4wbd-a1-m2-cA 540 24 0.1358 0.0204 0.4583 1.8 4wbd-a1-m1-cA_4wbd-a1-m2-cA
9 4wbd-a1-m1-cA 540 24 0.1358 0.0204 0.4583 1.8 4wbd-a1-m1-cA_4wbd-a1-m2-cA
10 5a6b-a2-m1-cD 616 37 0.1728 0.0227 0.3784 2.0 5a6b-a2-m1-cC_5a6b-a2-m1-cD
11 5a6b-a2-m1-cC 610 37 0.1728 0.0230 0.3784 2.0 5a6b-a2-m1-cC_5a6b-a2-m1-cD
12 5i32-a1-m4-cA 238 22 0.1358 0.0462 0.5000 3.9 5i32-a1-m2-cA_5i32-a1-m4-cA
13 5i32-a1-m2-cA 238 22 0.1358 0.0462 0.5000 3.9 5i32-a1-m2-cA_5i32-a1-m4-cA
14 3tty-a3-m1-cF 675 44 0.1605 0.0193 0.2955 7.2 3tty-a3-m1-cB_3tty-a3-m1-cF, 3tty-a3-m1-cE_3tty-a3-m1-cF
15 3tty-a3-m1-cE 675 44 0.1605 0.0193 0.2955 7.2 3tty-a3-m1-cE_3tty-a3-m1-cF
16 3tty-a3-m1-cB 675 44 0.1605 0.0193 0.2955 7.2 3tty-a3-m1-cB_3tty-a3-m1-cF
17 5z1z-a1-m1-cB 314 38 0.1358 0.0350 0.2895 7.7 5z1z-a1-m1-cB_5z1z-a1-m1-cC
18 7lm0-a1-m1-cB 446 15 0.1111 0.0202 0.6000 8.8 7lm0-a1-m1-cB_7lm0-a1-m1-cA
19 7lm0-a1-m1-cA 449 15 0.1111 0.0200 0.6000 8.8 7lm0-a1-m1-cB_7lm0-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600