Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
TNRLVLSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQPVIVSGHENQAI
THSITVGSRITVQGFISCHKAKNGLSKVLHAEQIELI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1woc-a1-m1-cD 97 97 1.0000 1.0000 1.0000 1.18e-67 1woc-a1-m1-cB_1woc-a1-m1-cD
2 1woc-a1-m1-cB 97 97 1.0000 1.0000 1.0000 1.18e-67 1woc-a1-m1-cB_1woc-a1-m1-cD
3 1txy-a1-m1-cA 89 97 0.9175 1.0000 0.9175 2.21e-58 1txy-a1-m1-cB_1txy-a1-m1-cA
4 4apv-a1-m2-cA 97 98 0.8557 0.8557 0.8469 8.82e-55 4apv-a1-m1-cA_4apv-a1-m2-cA
5 4apv-a1-m1-cA 97 98 0.8557 0.8557 0.8469 8.82e-55 4apv-a1-m1-cA_4apv-a1-m2-cA
6 1txy-a1-m1-cB 81 95 0.8351 1.0000 0.8526 3.75e-50 1txy-a1-m1-cB_1txy-a1-m1-cA
7 3k8a-a1-m1-cA 100 98 0.3093 0.3000 0.3061 7.36e-04 3k8a-a1-m1-cA_3k8a-a1-m1-cB
8 3k8a-a1-m1-cB 103 98 0.3093 0.2913 0.3061 0.001 3k8a-a1-m1-cA_3k8a-a1-m1-cB
9 5xgt-a1-m1-cA 104 82 0.2062 0.1923 0.2439 0.029 5xgt-a1-m1-cA_5xgt-a1-m1-cB
10 5xgt-a1-m1-cB 105 82 0.2062 0.1905 0.2439 0.036 5xgt-a1-m1-cA_5xgt-a1-m1-cB
11 7d8j-a1-m2-cA 112 82 0.2062 0.1786 0.2439 0.048 7d8j-a1-m1-cA_7d8j-a1-m2-cA, 7d8j-a1-m2-cB_7d8j-a1-m2-cA
12 7d8j-a1-m1-cA 112 82 0.2062 0.1786 0.2439 0.048 7d8j-a1-m1-cA_7d8j-a1-m2-cA, 7d8j-a1-m2-cB_7d8j-a1-m1-cA
13 7d8j-a1-m2-cB 98 73 0.1959 0.1939 0.2603 0.13 7d8j-a1-m2-cB_7d8j-a1-m1-cA, 7d8j-a1-m2-cB_7d8j-a1-m2-cA
14 6bhw-a2-m1-cE 99 41 0.1443 0.1414 0.3415 0.22 6bhw-a2-m1-cE_6bhw-a2-m1-cG, 6bhw-a2-m1-cF_6bhw-a2-m1-cE
15 6bhx-a1-m1-cC 102 40 0.1340 0.1275 0.3250 1.8 6bhx-a1-m1-cA_6bhx-a1-m1-cC
16 4aib-a2-m1-cD 325 53 0.1237 0.0369 0.2264 2.0 4aib-a2-m1-cC_4aib-a2-m1-cD
17 6bhx-a1-m1-cA 98 40 0.1340 0.1327 0.3250 2.2 6bhx-a1-m1-cA_6bhx-a1-m1-cC
18 4wbd-a1-m2-cA 540 24 0.1134 0.0204 0.4583 2.5 4wbd-a1-m1-cA_4wbd-a1-m2-cA
19 4wbd-a1-m1-cA 540 24 0.1134 0.0204 0.4583 2.5 4wbd-a1-m1-cA_4wbd-a1-m2-cA
20 3lgj-a1-m1-cA 95 79 0.1753 0.1789 0.2152 3.3 3lgj-a1-m1-cA_3lgj-a1-m1-cB
21 5z1z-a1-m1-cB 314 47 0.1237 0.0382 0.2553 5.5 5z1z-a1-m1-cB_5z1z-a1-m1-cC
22 5i32-a1-m4-cA 238 22 0.1134 0.0462 0.5000 6.8 5i32-a1-m2-cA_5i32-a1-m4-cA
23 5i32-a1-m2-cA 238 22 0.1134 0.0462 0.5000 6.8 5i32-a1-m2-cA_5i32-a1-m4-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600