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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
TNWSRRYKANLEKLASGDVNKVAEVVRDLWRRDQERGLSAGEKRMLAKARQILVGELALA
ESTDDAKAETILDEVLAAA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4kmc-a2-m2-cA 79 79 1.0000 1.0000 1.0000 1.33e-50 4kmc-a2-m1-cA_4kmc-a2-m2-cA
2 4kmc-a2-m1-cA 79 79 1.0000 1.0000 1.0000 1.33e-50 4kmc-a2-m1-cA_4kmc-a2-m2-cA
3 4ilu-a1-m2-cA 165 79 0.9494 0.4545 0.9494 1.79e-45 4ilu-a1-m1-cA_4ilu-a1-m2-cA
4 4ilu-a1-m1-cA 165 79 0.9494 0.4545 0.9494 1.79e-45 4ilu-a1-m1-cA_4ilu-a1-m2-cA
5 5e26-a2-m1-cD 360 63 0.2278 0.0500 0.2857 0.16 5e26-a2-m1-cD_5e26-a2-m1-cC
6 5e26-a2-m1-cC 361 63 0.2278 0.0499 0.2857 0.16 5e26-a2-m1-cD_5e26-a2-m1-cC
7 2i7n-a1-m1-cA 325 63 0.2025 0.0492 0.2540 1.6 2i7n-a1-m1-cA_2i7n-a1-m1-cB
8 2i7n-a1-m1-cB 333 63 0.2025 0.0480 0.2540 1.6 2i7n-a1-m1-cA_2i7n-a1-m1-cB
9 3smp-a1-m1-cA 358 63 0.2025 0.0447 0.2540 1.7 3smp-a1-m1-cA_3smp-a1-m1-cB
10 3smp-a1-m1-cB 363 63 0.2025 0.0441 0.2540 1.7 3smp-a1-m1-cA_3smp-a1-m1-cB
11 2np3-a1-m1-cA 136 18 0.1392 0.0809 0.6111 5.2 2np3-a1-m1-cA_2np3-a1-m1-cB
12 2np3-a1-m1-cB 174 18 0.1392 0.0632 0.6111 5.6 2np3-a1-m1-cA_2np3-a1-m1-cB
13 5kqd-a2-m4-cA 312 63 0.2025 0.0513 0.2540 7.0 5kqd-a2-m1-cA_5kqd-a2-m4-cA, 5kqd-a2-m2-cA_5kqd-a2-m4-cA
14 5kqd-a2-m2-cA 312 63 0.2025 0.0513 0.2540 7.0 5kqd-a2-m2-cA_5kqd-a2-m4-cA
15 5kqd-a2-m1-cA 312 63 0.2025 0.0513 0.2540 7.0 5kqd-a2-m1-cA_5kqd-a2-m4-cA

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Reference:
Jacob Schwartz et al.

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