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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=58)
TPDESFLCYQPDQVCAFICRGAAPLPSEGECNPHPTAPWARVEWVPTGQCRTTCIPYV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2abz-a1-m1-cF 58 58 1.0000 1.0000 1.0000 1.41e-38 2abz-a1-m1-cF_2abz-a1-m1-cC
2 2abz-a1-m1-cC 62 62 0.9828 0.9194 0.9194 6.92e-34 2abz-a1-m1-cF_2abz-a1-m1-cC
3 4ewt-a1-m1-cD 389 33 0.2414 0.0360 0.4242 3.3 4ewt-a1-m1-cA_4ewt-a1-m1-cD, 4ewt-a1-m1-cB_4ewt-a1-m1-cD, 4ewt-a1-m1-cC_4ewt-a1-m1-cD
4 4ewt-a1-m1-cC 389 33 0.2414 0.0360 0.4242 3.3 4ewt-a1-m1-cC_4ewt-a1-m1-cD
5 4ewt-a1-m1-cA 389 33 0.2414 0.0360 0.4242 3.3 4ewt-a1-m1-cA_4ewt-a1-m1-cD
6 3r79-a3-m1-cB 218 44 0.2586 0.0688 0.3409 4.2 3r79-a3-m1-cB_3r79-a3-m2-cA
7 8i4z-a1-m1-cB 1687 21 0.1724 0.0059 0.4762 4.5 8i4z-a1-m1-cA_8i4z-a1-m1-cB
8 8i4z-a1-m1-cA 1687 21 0.1724 0.0059 0.4762 4.5 8i4z-a1-m1-cA_8i4z-a1-m1-cB
9 5oyn-a1-m1-cB 588 38 0.2414 0.0238 0.3684 6.0 5oyn-a1-m1-cD_5oyn-a1-m1-cB
10 5oyn-a1-m1-cA 588 38 0.2414 0.0238 0.3684 6.0 5oyn-a1-m1-cD_5oyn-a1-m1-cA
11 5oyn-a1-m1-cD 587 38 0.2414 0.0239 0.3684 6.0 5oyn-a1-m1-cC_5oyn-a1-m1-cD, 5oyn-a1-m1-cD_5oyn-a1-m1-cA, 5oyn-a1-m1-cD_5oyn-a1-m1-cB
12 5oyn-a1-m1-cC 587 38 0.2414 0.0239 0.3684 6.0 5oyn-a1-m1-cC_5oyn-a1-m1-cD
13 4ffv-a1-m1-cA 727 13 0.1379 0.0110 0.6154 6.4 4ffv-a1-m1-cA_4ffv-a1-m1-cB
14 4ffv-a1-m1-cB 729 13 0.1379 0.0110 0.6154 6.4 4ffv-a1-m1-cA_4ffv-a1-m1-cB
15 2gbc-a2-m3-cB 730 13 0.1379 0.0110 0.6154 6.4 2gbc-a2-m2-cB_2gbc-a2-m3-cB
16 2gbc-a2-m2-cB 730 13 0.1379 0.0110 0.6154 6.4 2gbc-a2-m2-cB_2gbc-a2-m3-cB
17 2hox-a3-m1-cD 427 36 0.1897 0.0258 0.3056 9.7 2hox-a3-m1-cA_2hox-a3-m1-cD, 2hox-a3-m1-cC_2hox-a3-m1-cD
18 2hox-a3-m1-cB 427 36 0.1897 0.0258 0.3056 9.7 2hox-a3-m1-cC_2hox-a3-m1-cB

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Reference:
Jacob Schwartz et al.

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