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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
TPEELRGVARQYNVESSNVTELIARLDQMSHTLQGIWEGASSEAFIQQYQELRPSFEKMA
VLLNEVGQQLHNSATILEDTDQQIASQIRG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3zbh-a3-m1-cC 90 90 1.0000 1.0000 1.0000 1.43e-62 3zbh-a3-m1-cC_3zbh-a3-m1-cD
2 3zbh-a3-m1-cD 93 89 0.9889 0.9570 1.0000 1.38e-61 3zbh-a3-m1-cC_3zbh-a3-m1-cD
3 3o9o-a1-m1-cA 92 88 0.4111 0.4022 0.4205 8.74e-17 3o9o-a1-m1-cA_3o9o-a1-m1-cB
4 3o9o-a1-m1-cB 96 88 0.4111 0.3854 0.4205 9.36e-17 3o9o-a1-m1-cA_3o9o-a1-m1-cB
5 2vs0-a1-m1-cB 83 81 0.2889 0.3133 0.3210 1.66e-11 2vs0-a1-m1-cA_2vs0-a1-m1-cB
6 2vs0-a1-m1-cA 81 79 0.2778 0.3086 0.3165 1.20e-10 2vs0-a1-m1-cA_2vs0-a1-m1-cB
7 2gwc-a4-m1-cG 420 57 0.1778 0.0381 0.2807 1.4 2gwc-a4-m1-cH_2gwc-a4-m1-cG
8 2ppw-a3-m2-cB 202 28 0.1444 0.0644 0.4643 4.4 2ppw-a3-m1-cB_2ppw-a3-m2-cB, 2ppw-a3-m2-cB_2ppw-a3-m1-cA, 2ppw-a3-m2-cB_2ppw-a3-m2-cA
9 2ppw-a3-m1-cB 202 28 0.1444 0.0644 0.4643 4.4 2ppw-a3-m1-cB_2ppw-a3-m2-cB
10 2ppw-a3-m2-cA 203 28 0.1444 0.0640 0.4643 4.4 2ppw-a3-m2-cB_2ppw-a3-m2-cA
11 2ppw-a3-m1-cA 203 28 0.1444 0.0640 0.4643 4.4 2ppw-a3-m2-cB_2ppw-a3-m1-cA
12 2gwc-a4-m1-cH 418 50 0.1556 0.0335 0.2800 5.3 2gwc-a4-m1-cH_2gwc-a4-m1-cG
13 4k3w-a1-m1-cC 255 29 0.1333 0.0471 0.4138 7.8 4k3w-a1-m1-cB_4k3w-a1-m1-cC
14 4k3w-a1-m1-cB 254 29 0.1333 0.0472 0.4138 8.0 4k3w-a1-m1-cB_4k3w-a1-m1-cC
15 4fma-a16-m1-cI 348 34 0.1333 0.0345 0.3529 8.2 4fma-a16-m1-cI_4fma-a16-m1-cE
16 4fma-a16-m1-cE 349 34 0.1333 0.0344 0.3529 8.5 4fma-a16-m1-cI_4fma-a16-m1-cE

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Reference:
Jacob Schwartz et al.

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