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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
TPIELKGSSFTLSVVHLHEAEPKVIHQALEDKIAQAPAFLKHAPVVLNVSALEDPVNWSA
MHKAVSATGLRVIGVSGCKDAQLKAEIEKMGLPILTEG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4l1c-a1-m1-cB 98 98 1.0000 1.0000 1.0000 1.77e-67 4l1c-a1-m1-cA_4l1c-a1-m1-cB
2 4l1c-a1-m1-cA 98 98 1.0000 1.0000 1.0000 1.77e-67 4l1c-a1-m1-cA_4l1c-a1-m1-cB
3 3ghf-a1-m2-cA 100 97 0.8163 0.8000 0.8247 3.04e-56 3ghf-a1-m1-cA_3ghf-a1-m2-cA
4 3ghf-a1-m1-cA 100 97 0.8163 0.8000 0.8247 3.04e-56 3ghf-a1-m1-cA_3ghf-a1-m2-cA
5 3b97-a2-m1-cD 431 40 0.1429 0.0325 0.3500 0.41 3b97-a2-m1-cD_3b97-a2-m1-cC
6 3b97-a2-m1-cC 433 40 0.1429 0.0323 0.3500 0.42 3b97-a2-m1-cD_3b97-a2-m1-cC
7 5hnu-a1-m1-cC 315 91 0.2449 0.0762 0.2637 0.73 5hnu-a1-m1-cA_5hnu-a1-m1-cC
8 5hnu-a1-m1-cA 315 91 0.2449 0.0762 0.2637 0.73 5hnu-a1-m1-cA_5hnu-a1-m1-cC
9 7f7j-a1-m2-cA 301 29 0.1224 0.0399 0.4138 4.7 7f7j-a1-m2-cA_7f7j-a1-m1-cB
10 7f7j-a1-m1-cB 306 29 0.1224 0.0392 0.4138 5.1 7f7j-a1-m2-cA_7f7j-a1-m1-cB
11 4ckl-a2-m3-cB 434 34 0.1429 0.0323 0.4118 5.4 4ckl-a2-m1-cB_4ckl-a2-m3-cB
12 4ckl-a2-m1-cB 434 34 0.1429 0.0323 0.4118 5.4 4ckl-a2-m1-cB_4ckl-a2-m3-cB
13 2ipf-a1-m1-cB 318 103 0.2653 0.0818 0.2524 5.4 2ipf-a1-m1-cA_2ipf-a1-m1-cB
14 2ipf-a1-m1-cA 318 103 0.2653 0.0818 0.2524 5.4 2ipf-a1-m1-cA_2ipf-a1-m1-cB
15 2he5-a2-m1-cB 318 103 0.2653 0.0818 0.2524 5.4 2he5-a2-m1-cD_2he5-a2-m1-cB
16 2he5-a2-m1-cD 314 103 0.2653 0.0828 0.2524 6.0 2he5-a2-m1-cD_2he5-a2-m1-cB
17 1i4j-a1-m1-cB 110 42 0.1327 0.1182 0.3095 6.0 1i4j-a1-m1-cA_1i4j-a1-m1-cB
18 1i4j-a1-m1-cA 110 42 0.1327 0.1182 0.3095 6.0 1i4j-a1-m1-cA_1i4j-a1-m1-cB
19 7dpa-a1-m1-cD 1642 56 0.1735 0.0104 0.3036 6.3 7dpa-a1-m1-cA_7dpa-a1-m1-cD
20 7dpa-a1-m1-cA 1642 56 0.1735 0.0104 0.3036 6.3 7dpa-a1-m1-cA_7dpa-a1-m1-cD
21 3nwj-a3-m1-cB 192 63 0.1735 0.0885 0.2698 7.5 3nwj-a3-m1-cB_3nwj-a3-m1-cA
22 1gz0-a3-m1-cH 242 47 0.1429 0.0579 0.2979 8.0 1gz0-a3-m1-cC_1gz0-a3-m1-cH
23 3nwj-a3-m1-cA 194 63 0.1735 0.0876 0.2698 8.7 3nwj-a3-m1-cB_3nwj-a3-m1-cA
24 1gz0-a3-m1-cC 235 47 0.1429 0.0596 0.2979 9.0 1gz0-a3-m1-cC_1gz0-a3-m1-cH
25 2x0s-a1-m2-cA 899 37 0.1327 0.0145 0.3514 9.5 2x0s-a1-m1-cA_2x0s-a1-m2-cA
26 2x0s-a1-m1-cA 899 37 0.1327 0.0145 0.3514 9.5 2x0s-a1-m1-cA_2x0s-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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