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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
TPQNITDLCAEYHNTQIYTLNDKIFSYTESLAGKREMAIITFKNGAIFQVEVPSQKKAIE
RMKDTLRIAYLTEAKVEKLCVWNNKTPHAIAAISMAN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6hsv-a2-m1-cC 97 97 1.0000 1.0000 1.0000 7.24e-70 6hsv-a2-m1-cC_6hsv-a2-m1-cD
2 6hsv-a2-m1-cD 103 103 1.0000 0.9417 0.9417 2.67e-67 6hsv-a2-m1-cC_6hsv-a2-m1-cD
3 3efx-a1-m1-cH 100 99 0.9072 0.8800 0.8889 3.22e-61 3efx-a1-m1-cG_3efx-a1-m1-cH
4 3efx-a1-m1-cG 95 95 0.8969 0.9158 0.9158 3.39e-61 3efx-a1-m1-cG_3efx-a1-m1-cH
5 4l63-a1-m1-cE 104 103 0.7010 0.6538 0.6602 1.72e-46 4l63-a1-m1-cF_4l63-a1-m1-cE
6 4l63-a1-m1-cF 103 103 0.7010 0.6602 0.6602 1.98e-46 4l63-a1-m1-cF_4l63-a1-m1-cE
7 2wv6-a1-m1-cK 94 95 0.7010 0.7234 0.7158 2.39e-46 2wv6-a1-m1-cL_2wv6-a1-m1-cK
8 2wv6-a1-m1-cL 91 95 0.6804 0.7253 0.6947 1.19e-42 2wv6-a1-m1-cL_2wv6-a1-m1-cK
9 7o85-a1-m1-cS 332 24 0.1340 0.0392 0.5417 6.2 7o85-a1-m1-cP_7o85-a1-m1-cS
10 7o85-a1-m1-cP 332 24 0.1340 0.0392 0.5417 6.2 7o85-a1-m1-cP_7o85-a1-m1-cS
11 4yxq-a2-m1-cD 402 27 0.1031 0.0249 0.3704 6.9 4yxq-a2-m1-cD_4yxq-a2-m1-cC
12 3hq0-a1-m1-cD 288 47 0.1546 0.0521 0.3191 7.0 3hq0-a1-m1-cB_3hq0-a1-m1-cD
13 3hq0-a1-m1-cB 288 47 0.1546 0.0521 0.3191 7.0 3hq0-a1-m1-cB_3hq0-a1-m1-cD
14 3hpy-a1-m1-cB 288 47 0.1546 0.0521 0.3191 7.0 3hpy-a1-m1-cA_3hpy-a1-m1-cB
15 3hpy-a1-m1-cA 288 47 0.1546 0.0521 0.3191 7.0 3hpy-a1-m1-cA_3hpy-a1-m1-cB
16 3hpv-a1-m1-cC 288 47 0.1546 0.0521 0.3191 7.0 3hpv-a1-m1-cB_3hpv-a1-m1-cC
17 3hpv-a1-m1-cB 288 47 0.1546 0.0521 0.3191 7.0 3hpv-a1-m1-cB_3hpv-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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