Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=86)
TPTPSNVVLIGKKPVMNYVLAALTLLNQGVSEIVIKARGRAISKAVDTVEIVRNRFLPDK
IEIKEIRVGSQVVSRVSTIEIAIRKK

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 3wbm-a1-m1-cC 86 86 1.0000 1.0000 1.0000 1.32e-55 3wbm-a1-m1-cA_3wbm-a1-m1-cC
2 3wbm-a1-m1-cA 86 86 1.0000 1.0000 1.0000 1.32e-55 3wbm-a1-m1-cA_3wbm-a1-m1-cC
3 2bky-a1-m1-cB 89 89 0.9535 0.9213 0.9213 3.10e-49 2bky-a1-m1-cA_2bky-a1-m1-cB
4 2bky-a1-m1-cA 89 89 0.9535 0.9213 0.9213 3.10e-49 2bky-a1-m1-cA_2bky-a1-m1-cB
5 1h0x-a1-m1-cB 89 89 0.9535 0.9213 0.9213 3.10e-49 1h0x-a1-m1-cA_1h0x-a1-m1-cB
6 1h0x-a1-m1-cA 89 89 0.9535 0.9213 0.9213 3.10e-49 1h0x-a1-m1-cA_1h0x-a1-m1-cB
7 2z7c-a2-m1-cD 92 91 0.5698 0.5326 0.5385 7.58e-29 2z7c-a2-m1-cC_2z7c-a2-m1-cD
8 2z7c-a2-m1-cC 89 88 0.5581 0.5393 0.5455 4.59e-28 2z7c-a2-m1-cC_2z7c-a2-m1-cD
9 1nfj-a1-m4-cA 87 88 0.5814 0.5747 0.5682 5.45e-27 1nfj-a1-m1-cA_1nfj-a1-m4-cA
10 1nfj-a1-m3-cA 87 88 0.5814 0.5747 0.5682 5.45e-27 1nfj-a1-m1-cA_1nfj-a1-m3-cA
11 1nfj-a1-m1-cA 87 88 0.5814 0.5747 0.5682 5.45e-27 1nfj-a1-m1-cA_1nfj-a1-m3-cA, 1nfj-a1-m1-cA_1nfj-a1-m4-cA
12 1nfh-a1-m2-cB 86 87 0.5814 0.5814 0.5747 5.60e-27 1nfh-a1-m1-cA_1nfh-a1-m2-cB
13 1nfh-a1-m1-cA 86 87 0.5814 0.5814 0.5747 5.60e-27 1nfh-a1-m1-cA_1nfh-a1-m2-cB
14 3toe-a1-m1-cB 86 87 0.5581 0.5581 0.5517 7.32e-25 3toe-a1-m1-cA_3toe-a1-m1-cB
15 3toe-a1-m1-cA 86 87 0.5581 0.5581 0.5517 7.32e-25 3toe-a1-m1-cA_3toe-a1-m1-cB
16 3u6y-a1-m1-cC 99 90 0.5581 0.4848 0.5333 4.37e-22 3u6y-a1-m1-cA_3u6y-a1-m1-cC
17 3u6y-a1-m1-cA 99 90 0.5581 0.4848 0.5333 4.37e-22 3u6y-a1-m1-cA_3u6y-a1-m1-cC
18 4z9e-a2-m1-cD 85 86 0.4651 0.4706 0.4651 5.91e-22 4z9e-a2-m1-cC_4z9e-a2-m1-cD
19 4z9e-a2-m1-cC 85 86 0.4651 0.4706 0.4651 5.91e-22 4z9e-a2-m1-cC_4z9e-a2-m1-cD
20 1udv-a1-m1-cA 88 86 0.3488 0.3409 0.3488 2.80e-10 1udv-a1-m1-cB_1udv-a1-m1-cA
21 2bky-a1-m1-cY 86 74 0.3256 0.3256 0.3784 4.91e-10 2bky-a1-m1-cX_2bky-a1-m1-cY
22 2bky-a1-m1-cX 86 74 0.3256 0.3256 0.3784 4.91e-10 2bky-a1-m1-cX_2bky-a1-m1-cY
23 1udv-a1-m1-cB 86 74 0.3256 0.3256 0.3784 4.91e-10 1udv-a1-m1-cB_1udv-a1-m1-cA
24 4ian-a1-m1-cB 319 39 0.1744 0.0470 0.3846 2.0 4ian-a1-m1-cB_4ian-a1-m1-cA
25 4ian-a1-m1-cA 321 39 0.1744 0.0467 0.3846 2.2 4ian-a1-m1-cB_4ian-a1-m1-cA
26 8app-a1-m1-cC 190 32 0.1395 0.0632 0.3750 3.8 8app-a1-m2-cD_8app-a1-m1-cC, 8app-a1-m3-cA_8app-a1-m1-cC, 8app-a1-m4-cB_8app-a1-m1-cC
27 8app-a1-m4-cB 189 32 0.1395 0.0635 0.3750 4.0 8app-a1-m2-cD_8app-a1-m4-cB, 8app-a1-m3-cA_8app-a1-m4-cB, 8app-a1-m4-cB_8app-a1-m1-cC
28 8app-a1-m3-cA 187 32 0.1395 0.0642 0.3750 4.0 8app-a1-m3-cA_8app-a1-m1-cC, 8app-a1-m3-cA_8app-a1-m2-cD, 8app-a1-m3-cA_8app-a1-m4-cB
29 8app-a1-m2-cD 188 32 0.1395 0.0638 0.3750 4.0 8app-a1-m2-cD_8app-a1-m1-cC, 8app-a1-m2-cD_8app-a1-m4-cB, 8app-a1-m3-cA_8app-a1-m2-cD
30 2gj2-a5-m5-cB 79 37 0.1512 0.1646 0.3514 4.6 2gj2-a5-m1-cD_2gj2-a5-m5-cB
31 2gj2-a5-m1-cD 79 37 0.1512 0.1646 0.3514 4.6 2gj2-a5-m1-cD_2gj2-a5-m5-cB
32 2gj2-a3-m3-cD 79 37 0.1512 0.1646 0.3514 4.6 2gj2-a3-m1-cA_2gj2-a3-m3-cD
33 2gj2-a3-m1-cA 79 37 0.1512 0.1646 0.3514 4.6 2gj2-a3-m1-cA_2gj2-a3-m3-cD
34 2gj2-a2-m1-cC 79 37 0.1512 0.1646 0.3514 4.6 2gj2-a2-m1-cB_2gj2-a2-m1-cC
35 2gj2-a2-m1-cB 79 37 0.1512 0.1646 0.3514 4.6 2gj2-a2-m1-cB_2gj2-a2-m1-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600