Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=77)
TQEAFDLISKENPSSQYWKEVAEQRRKALYEALKENEKLHKEIEQKDSEIARLRKENKDL
AEVAEHVQYAEVIERLS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2zxx-a2-m1-cE 77 77 1.0000 1.0000 1.0000 1.03e-49 2zxx-a2-m1-cD_2zxx-a2-m1-cE
2 2wvr-a1-m2-cB 74 74 0.8442 0.8784 0.8784 8.11e-40 2wvr-a1-m2-cA_2wvr-a1-m2-cB
3 2zxx-a2-m1-cD 64 63 0.8182 0.9844 1.0000 3.28e-38 2zxx-a2-m1-cD_2zxx-a2-m1-cE
4 2wvr-a1-m2-cA 70 69 0.8052 0.8857 0.8986 7.40e-37 2wvr-a1-m2-cA_2wvr-a1-m2-cB
5 6gir-a1-m2-cA 406 54 0.2597 0.0493 0.3704 0.86 6gir-a1-m1-cA_6gir-a1-m2-cA
6 6gir-a1-m1-cA 406 54 0.2597 0.0493 0.3704 0.86 6gir-a1-m1-cA_6gir-a1-m2-cA
7 2j5u-a1-m9-cB 201 21 0.1688 0.0647 0.6190 1.0 2j5u-a1-m10-cB_2j5u-a1-m9-cB, 2j5u-a1-m6-cB_2j5u-a1-m9-cB, 2j5u-a1-m9-cB_2j5u-a1-m9-cA
8 2j5u-a1-m6-cB 201 21 0.1688 0.0647 0.6190 1.0 2j5u-a1-m6-cB_2j5u-a1-m9-cB
9 2j5u-a1-m10-cB 201 21 0.1688 0.0647 0.6190 1.0 2j5u-a1-m10-cB_2j5u-a1-m9-cB
10 2j5u-a1-m9-cA 210 21 0.1688 0.0619 0.6190 1.0 2j5u-a1-m9-cB_2j5u-a1-m9-cA
11 3ppm-a1-m1-cB 545 36 0.1558 0.0220 0.3333 3.1 3ppm-a1-m1-cB_3ppm-a1-m1-cA
12 3ppm-a1-m1-cA 546 36 0.1558 0.0220 0.3333 3.1 3ppm-a1-m1-cB_3ppm-a1-m1-cA
13 3thf-a2-m2-cA 175 35 0.1688 0.0743 0.3714 3.6 3thf-a2-m2-cB_3thf-a2-m2-cA
14 3thf-a2-m1-cA 175 35 0.1688 0.0743 0.3714 3.6 3thf-a2-m2-cB_3thf-a2-m1-cA
15 3thf-a2-m2-cB 174 35 0.1688 0.0747 0.3714 3.7 3thf-a2-m2-cB_3thf-a2-m1-cA, 3thf-a2-m2-cB_3thf-a2-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600