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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
TQFQKLMENMRNDIASHPPVEGSYAPRRGEFCIAKFVDGEWYRARVEKVESPAKIHVFYI
DYGNREVLPSTRLGTLSPAFSTRVLPAQAT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2hqx-a1-m1-cB 90 90 1.0000 1.0000 1.0000 4.28e-65 2hqx-a1-m1-cA_2hqx-a1-m1-cB
2 2hqx-a1-m1-cA 90 90 1.0000 1.0000 1.0000 4.28e-65 2hqx-a1-m1-cA_2hqx-a1-m1-cB
3 2o4x-a1-m1-cA 217 90 0.9889 0.4101 0.9889 7.77e-64 2o4x-a1-m1-cB_2o4x-a1-m1-cA
4 3bdl-a2-m2-cA 537 90 0.9778 0.1639 0.9778 4.55e-60 3bdl-a2-m1-cA_3bdl-a2-m2-cA
5 3bdl-a2-m1-cA 537 90 0.9778 0.1639 0.9778 4.55e-60 3bdl-a2-m1-cA_3bdl-a2-m2-cA
6 2o4x-a1-m1-cB 87 90 0.9444 0.9770 0.9444 2.93e-59 2o4x-a1-m1-cB_2o4x-a1-m1-cA
7 4b9w-a1-m1-cA 196 89 0.3000 0.1378 0.3034 3.30e-07 4b9w-a1-m1-cB_4b9w-a1-m1-cA
8 4b9w-a1-m1-cB 191 84 0.2667 0.1257 0.2857 4.00e-06 4b9w-a1-m1-cB_4b9w-a1-m1-cA
9 4q5y-a2-m2-cA 353 47 0.2000 0.0510 0.3830 3.39e-04 4q5y-a2-m1-cA_4q5y-a2-m2-cA
10 4q5y-a2-m2-cA 353 33 0.1444 0.0368 0.3939 0.49 4q5y-a2-m1-cA_4q5y-a2-m2-cA
11 4q5y-a2-m1-cA 353 47 0.2000 0.0510 0.3830 3.39e-04 4q5y-a2-m1-cA_4q5y-a2-m2-cA
12 4q5y-a2-m1-cA 353 33 0.1444 0.0368 0.3939 0.49 4q5y-a2-m1-cA_4q5y-a2-m2-cA
13 3hyx-a2-m1-cF 428 84 0.2667 0.0561 0.2857 0.47 3hyx-a2-m1-cB_3hyx-a2-m1-cF
14 3hyx-a2-m1-cB 428 84 0.2667 0.0561 0.2857 0.47 3hyx-a2-m1-cB_3hyx-a2-m1-cF

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Reference:
Jacob Schwartz et al.

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