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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=66)
TQLMGERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKALQCSPD
YLLKGD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2r1j-a1-m1-cR 66 66 1.0000 1.0000 1.0000 1.04e-43 2r1j-a1-m1-cL_2r1j-a1-m1-cR
2 2r1j-a1-m1-cL 66 66 1.0000 1.0000 1.0000 1.04e-43 2r1j-a1-m1-cL_2r1j-a1-m1-cR
3 7t8i-a1-m1-cB 64 57 0.2727 0.2812 0.3158 5.71e-05 7t8i-a1-m1-cA_7t8i-a1-m1-cB
4 7t8i-a1-m1-cA 63 57 0.3030 0.3175 0.3509 1.25e-04 7t8i-a1-m1-cA_7t8i-a1-m1-cB
5 4yba-a1-m1-cA 77 51 0.2273 0.1948 0.2941 0.014 4yba-a1-m1-cA_4yba-a1-m1-cB
6 4yba-a1-m1-cB 78 51 0.2273 0.1923 0.2941 0.015 4yba-a1-m1-cA_4yba-a1-m1-cB
7 6jq1-a1-m1-cA 129 62 0.2879 0.1473 0.3065 0.022 6jq1-a1-m1-cA_6jq1-a1-m1-cB
8 6jq1-a1-m1-cB 130 62 0.2879 0.1462 0.3065 0.024 6jq1-a1-m1-cA_6jq1-a1-m1-cB
9 6af4-a2-m1-cD 92 61 0.3333 0.2391 0.3607 0.087 6af4-a2-m1-cF_6af4-a2-m1-cD
10 6af4-a2-m1-cF 91 61 0.3333 0.2418 0.3607 0.089 6af4-a2-m1-cF_6af4-a2-m1-cD
11 6rmq-a2-m3-cB 121 62 0.2727 0.1488 0.2903 0.22 6rmq-a2-m1-cB_6rmq-a2-m3-cB
12 6rmq-a2-m1-cB 121 62 0.2727 0.1488 0.2903 0.22 6rmq-a2-m1-cB_6rmq-a2-m3-cB
13 3zkc-a1-m1-cB 63 62 0.2879 0.3016 0.3065 0.34 3zkc-a1-m1-cA_3zkc-a1-m1-cB
14 5j9i-a4-m1-cG 65 57 0.1970 0.2000 0.2281 0.37 5j9i-a4-m1-cG_5j9i-a4-m1-cH
15 8a0w-a1-m1-cB 68 57 0.1970 0.1912 0.2281 0.38 8a0w-a1-m1-cA_8a0w-a1-m1-cB
16 8a0w-a1-m1-cA 68 57 0.1970 0.1912 0.2281 0.38 8a0w-a1-m1-cA_8a0w-a1-m1-cB
17 5j9i-a4-m1-cH 68 57 0.1970 0.1912 0.2281 0.38 5j9i-a4-m1-cG_5j9i-a4-m1-cH
18 3zkc-a1-m1-cA 61 61 0.2879 0.3115 0.3115 0.76 3zkc-a1-m1-cA_3zkc-a1-m1-cB
19 1b0n-a6-m3-cA 103 62 0.2879 0.1845 0.3065 0.90 1b0n-a6-m1-cA_1b0n-a6-m3-cA
20 1b0n-a6-m1-cA 103 62 0.2879 0.1845 0.3065 0.90 1b0n-a6-m1-cA_1b0n-a6-m3-cA
21 1b0n-a5-m2-cA 103 62 0.2879 0.1845 0.3065 0.90 1b0n-a5-m1-cA_1b0n-a5-m2-cA
22 1b0n-a5-m1-cA 103 62 0.2879 0.1845 0.3065 0.90 1b0n-a5-m1-cA_1b0n-a5-m2-cA
23 4ao6-a1-m2-cA 222 64 0.3030 0.0901 0.3125 1.3 4ao6-a1-m1-cA_4ao6-a1-m2-cA
24 4ao6-a1-m1-cA 222 64 0.3030 0.0901 0.3125 1.3 4ao6-a1-m1-cA_4ao6-a1-m2-cA
25 6yj2-a1-m1-cB 192 45 0.2576 0.0885 0.3778 5.8 6yj2-a1-m1-cA_6yj2-a1-m1-cB
26 7rml-a1-m2-cC 257 39 0.2273 0.0584 0.3846 5.9 7rml-a1-m1-cC_7rml-a1-m2-cC
27 7rml-a1-m1-cC 257 39 0.2273 0.0584 0.3846 5.9 7rml-a1-m1-cC_7rml-a1-m2-cC, 7rml-a1-m1-cC_7rml-a1-m4-cA
28 7rml-a1-m4-cA 281 39 0.2273 0.0534 0.3846 5.9 7rml-a1-m1-cC_7rml-a1-m4-cA, 7rml-a1-m2-cB_7rml-a1-m4-cA
29 7rml-a1-m2-cB 271 39 0.2273 0.0554 0.3846 6.3 7rml-a1-m2-cB_7rml-a1-m4-cA
30 6yj2-a1-m1-cA 186 45 0.2576 0.0914 0.3778 6.4 6yj2-a1-m1-cA_6yj2-a1-m1-cB
31 7ab5-a1-m1-cD 70 52 0.1970 0.1857 0.2500 7.9 7ab5-a1-m1-cA_7ab5-a1-m1-cD
32 7ab5-a1-m1-cA 70 52 0.1970 0.1857 0.2500 7.9 7ab5-a1-m1-cA_7ab5-a1-m1-cD
33 4ksa-a1-m1-cA 433 19 0.1364 0.0208 0.4737 7.9 4ksa-a1-m1-cD_4ksa-a1-m1-cA
34 6f8h-a2-m3-cC 93 61 0.2424 0.1720 0.2623 8.3 6f8h-a2-m3-cC_6f8h-a2-m1-cB
35 6f8h-a2-m1-cB 94 61 0.2424 0.1702 0.2623 8.4 6f8h-a2-m3-cC_6f8h-a2-m1-cB

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Reference:
Jacob Schwartz et al.

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