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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=49)
TRAGAEIHSLPNLNVEQKFAFIVSLFDDPSQSANLLAEAKKLNDAQAPK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5efw-a1-m1-cC 49 49 1.0000 1.0000 1.0000 4.73e-30 5efw-a1-m1-cC_5efw-a1-m1-cB
2 5efw-a1-m1-cB 55 49 1.0000 0.8909 1.0000 5.33e-30 5efw-a1-m1-cC_5efw-a1-m1-cB
3 2otk-a1-m1-cF 43 43 0.6939 0.7907 0.7907 1.52e-15 2otk-a1-m1-cE_2otk-a1-m1-cF
4 2otk-a1-m1-cE 43 43 0.6939 0.7907 0.7907 1.52e-15 2otk-a1-m1-cE_2otk-a1-m1-cF
5 7o8c-a1-m1-cB 579 40 0.6939 0.0587 0.8500 1.71e-13 7o8c-a1-m1-cB_7o8c-a1-m1-cA
6 7o8c-a1-m1-cA 582 40 0.6939 0.0584 0.8500 1.73e-13 7o8c-a1-m1-cB_7o8c-a1-m1-cA
7 6o2d-a1-m1-cA 134 32 0.2041 0.0746 0.3125 7.3 6o2d-a1-m1-cA_6o2d-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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