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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=43)
TRAVSLYFSDEQYQKLEKMANEEEESVGSYIKRYILKALRKIE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1x93-a1-m1-cB 43 43 1.0000 1.0000 1.0000 7.56e-25 1x93-a1-m1-cA_1x93-a1-m1-cB
2 1x93-a1-m1-cA 43 43 1.0000 1.0000 1.0000 7.56e-25 1x93-a1-m1-cA_1x93-a1-m1-cB
3 2k1o-a1-m1-cB 54 37 0.3953 0.3148 0.4595 4.84e-07 2k1o-a1-m1-cA_2k1o-a1-m1-cB
4 2k1o-a1-m1-cA 54 37 0.3953 0.3148 0.4595 4.84e-07 2k1o-a1-m1-cA_2k1o-a1-m1-cB
5 8em4-a1-m1-cB 3818 24 0.2558 0.0029 0.4583 1.9 8em4-a1-m1-cA_8em4-a1-m1-cB
6 8em4-a1-m1-cA 3818 24 0.2558 0.0029 0.4583 1.9 8em4-a1-m1-cA_8em4-a1-m1-cB
7 8em7-a1-m1-cB 4378 24 0.2558 0.0025 0.4583 1.9 8em7-a1-m1-cA_8em7-a1-m1-cB
8 8em7-a1-m1-cA 4378 24 0.2558 0.0025 0.4583 1.9 8em7-a1-m1-cA_8em7-a1-m1-cB
9 6k9l-a1-m1-cB 2551 40 0.3721 0.0063 0.4000 2.2 6k9l-a1-m1-cB_6k9l-a1-m1-cA
10 6k9l-a1-m1-cA 2552 40 0.3721 0.0063 0.4000 2.2 6k9l-a1-m1-cB_6k9l-a1-m1-cA
11 2isn-a1-m1-cA 324 19 0.2326 0.0309 0.5263 2.3 2isn-a1-m1-cB_2isn-a1-m1-cA
12 2isn-a1-m1-cB 322 19 0.2326 0.0311 0.5263 2.4 2isn-a1-m1-cB_2isn-a1-m1-cA
13 2mdv-a1-m1-cB 38 22 0.2093 0.2368 0.4091 2.5 2mdv-a1-m1-cA_2mdv-a1-m1-cB
14 2mdv-a1-m1-cA 38 22 0.2093 0.2368 0.4091 2.5 2mdv-a1-m1-cA_2mdv-a1-m1-cB
15 6az6-a1-m1-cA 203 33 0.2326 0.0493 0.3030 6.0 6az6-a1-m1-cB_6az6-a1-m1-cA
16 6az6-a1-m1-cB 200 33 0.2326 0.0500 0.3030 6.1 6az6-a1-m1-cB_6az6-a1-m1-cA
17 6q9k-a2-m1-cD 418 38 0.2326 0.0239 0.2632 7.5 6q9k-a2-m1-cB_6q9k-a2-m1-cD
18 6q9k-a2-m1-cB 418 38 0.2326 0.0239 0.2632 7.5 6q9k-a2-m1-cB_6q9k-a2-m1-cD
19 3c3m-a1-m2-cA 117 21 0.2326 0.0855 0.4762 8.4 3c3m-a1-m1-cA_3c3m-a1-m2-cA
20 3c3m-a1-m1-cA 117 21 0.2326 0.0855 0.4762 8.4 3c3m-a1-m1-cA_3c3m-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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