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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=68)
TREEEWLDKRTKSQEKVYFDQEDRKAMKRLLEKLNTAPQNLEVENILKRYHINYTQALID
ELVDWKTG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6ynz-a1-m1-ci4 68 68 1.0000 1.0000 1.0000 3.07e-45 6ynz-a1-m1-ci5_6ynz-a1-m1-ci4
2 6ynz-a1-m1-ci5 64 68 0.9412 1.0000 0.9412 3.52e-39 6ynz-a1-m1-ci5_6ynz-a1-m1-ci4
3 6sy1-a1-m1-cB 861 29 0.1471 0.0116 0.3448 1.2 6sy1-a1-m1-cA_6sy1-a1-m1-cB
4 6sy1-a1-m1-cA 859 29 0.1471 0.0116 0.3448 1.2 6sy1-a1-m1-cA_6sy1-a1-m1-cB
5 2dzd-a1-m1-cB 453 44 0.2353 0.0353 0.3636 1.5 2dzd-a1-m1-cB_2dzd-a1-m1-cA
6 2x5h-a1-m1-cA 92 37 0.1765 0.1304 0.3243 5.0 2x5h-a1-m1-cA_2x5h-a1-m1-cD
7 2x5h-a1-m1-cD 94 37 0.1765 0.1277 0.3243 6.1 2x5h-a1-m1-cA_2x5h-a1-m1-cD
8 2uy1-a1-m1-cA 438 15 0.1176 0.0183 0.5333 6.6 2uy1-a1-m1-cB_2uy1-a1-m1-cA
9 7cua-a1-m1-cC 87 31 0.1765 0.1379 0.3871 6.9 7cua-a1-m1-cA_7cua-a1-m1-cC
10 7cua-a1-m1-cB 87 31 0.1765 0.1379 0.3871 6.9 7cua-a1-m1-cA_7cua-a1-m1-cB
11 7cua-a1-m1-cA 87 31 0.1765 0.1379 0.3871 6.9 7cua-a1-m1-cA_7cua-a1-m1-cB, 7cua-a1-m1-cA_7cua-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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