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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=64)
TREEEWLDKRTKSQEKVYFDQEDRKAMKRLLEKLNTLEVENILKRYHINYTQALIDELVD
WKTG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6ynz-a1-m1-ci5 64 64 1.0000 1.0000 1.0000 2.31e-41 6ynz-a1-m1-ci5_6ynz-a1-m1-ci4
2 6ynz-a1-m1-ci4 68 68 1.0000 0.9412 0.9412 3.31e-39 6ynz-a1-m1-ci5_6ynz-a1-m1-ci4
3 6sy1-a1-m1-cB 861 51 0.2500 0.0186 0.3137 0.65 6sy1-a1-m1-cA_6sy1-a1-m1-cB
4 6sy1-a1-m1-cA 859 41 0.2031 0.0151 0.3171 0.74 6sy1-a1-m1-cA_6sy1-a1-m1-cB
5 8dgl-a1-m1-cD 67 37 0.2344 0.2239 0.4054 6.1 8dgl-a1-m1-cC_8dgl-a1-m1-cD
6 8dgl-a1-m1-cC 67 37 0.2344 0.2239 0.4054 6.1 8dgl-a1-m1-cC_8dgl-a1-m1-cD
7 2fe7-a2-m2-cA 154 54 0.2656 0.1104 0.3148 6.3 2fe7-a2-m2-cA_2fe7-a2-m2-cB
8 3e3b-a2-m2-cX 334 36 0.1719 0.0329 0.3056 9.6 3e3b-a2-m1-cX_3e3b-a2-m2-cX
9 3e3b-a2-m1-cX 334 36 0.1719 0.0329 0.3056 9.6 3e3b-a2-m1-cX_3e3b-a2-m2-cX

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Reference:
Jacob Schwartz et al.

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