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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=34)
TRGTTDNLIPVYCSILAAVVVGLVAYIAFKRWNS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2mic-a1-m1-cB 41 34 1.0000 0.8293 1.0000 1.59e-19 2mic-a1-m1-cA_2mic-a1-m1-cB
2 2mic-a1-m1-cA 41 34 1.0000 0.8293 1.0000 1.59e-19 2mic-a1-m1-cA_2mic-a1-m1-cB
3 5zgg-a1-m1-cB 34 34 1.0000 1.0000 1.0000 4.17e-19 5zgg-a1-m1-cA_5zgg-a1-m1-cB
4 5zgg-a1-m1-cA 34 34 1.0000 1.0000 1.0000 4.17e-19 5zgg-a1-m1-cA_5zgg-a1-m1-cB
5 2mjo-a1-m1-cB 41 34 0.9706 0.8049 0.9706 2.03e-18 2mjo-a1-m1-cA_2mjo-a1-m1-cB
6 2mjo-a1-m1-cA 41 34 0.9706 0.8049 0.9706 2.03e-18 2mjo-a1-m1-cA_2mjo-a1-m1-cB
7 3org-a2-m1-cC 534 20 0.2941 0.0187 0.5000 7.6 3org-a2-m1-cB_3org-a2-m1-cC
8 3org-a2-m1-cB 534 20 0.2941 0.0187 0.5000 7.6 3org-a2-m1-cB_3org-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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