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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=62)
TRRTGRTWADDQATYNRLREEADAARQKLREYSGAEYDQLRQAAFDLNRKANQYWEQMLS
DL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7xnj-a1-m1-cC 62 62 1.0000 1.0000 1.0000 2.24e-39 7xnj-a1-m1-cC_7xnj-a1-m1-cD
2 7xnj-a1-m1-cD 68 64 1.0000 0.9118 0.9688 1.96e-37 7xnj-a1-m1-cC_7xnj-a1-m1-cD, 7xnj-a1-m1-cD_7xnj-a1-m1-cB
3 7xnj-a1-m1-cB 69 64 1.0000 0.8986 0.9688 2.56e-37 7xnj-a1-m1-cD_7xnj-a1-m1-cB
4 3umb-a1-m2-cA 222 54 0.2419 0.0676 0.2778 1.4 3umb-a1-m1-cA_3umb-a1-m2-cA
5 3umb-a1-m1-cA 222 54 0.2419 0.0676 0.2778 1.4 3umb-a1-m1-cA_3umb-a1-m2-cA
6 5nc8-a1-m1-cA 159 35 0.2419 0.0943 0.4286 8.3 5nc8-a1-m1-cB_5nc8-a1-m1-cA
7 5nc8-a1-m1-cB 158 35 0.2419 0.0949 0.4286 8.5 5nc8-a1-m1-cB_5nc8-a1-m1-cA
8 6igv-a1-m2-cA 118 56 0.3226 0.1695 0.3571 9.4 6igv-a1-m1-cA_6igv-a1-m2-cA
9 6igv-a1-m1-cA 118 56 0.3226 0.1695 0.3571 9.4 6igv-a1-m1-cA_6igv-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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