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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=63)
TRWTPTTEQIKILKELYYNNAIRSPTADQIQKITARLRQFGKIEGKNVFYWFQNHKARER
QKK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6ryd-a2-m1-cE 68 63 1.0000 0.9265 1.0000 3.78e-42 6ryd-a2-m1-cF_6ryd-a2-m1-cE
2 6ryl-a2-m1-cD 63 63 1.0000 1.0000 1.0000 4.39e-42 6ryl-a2-m1-cD_6ryl-a2-m1-cE
3 6ryl-a2-m1-cE 64 63 1.0000 0.9844 1.0000 4.71e-42 6ryl-a2-m1-cD_6ryl-a2-m1-cE
4 6ryd-a2-m1-cF 58 58 0.9206 1.0000 1.0000 8.61e-39 6ryd-a2-m1-cF_6ryd-a2-m1-cE
5 6wig-a1-m2-cA 84 63 0.6984 0.5238 0.6984 2.43e-28 6wig-a1-m1-cB_6wig-a1-m2-cA
6 6wig-a1-m1-cB 68 63 0.6984 0.6471 0.6984 3.90e-28 6wig-a1-m1-cB_6wig-a1-m2-cA
7 4fyh-a2-m1-cC 125 43 0.2222 0.1120 0.3256 0.93 4fyh-a2-m1-cC_4fyh-a2-m1-cD
8 3q9t-a2-m1-cC 577 41 0.1905 0.0208 0.2927 1.6 3q9t-a2-m1-cB_3q9t-a2-m1-cC
9 3q9t-a2-m1-cB 577 41 0.1905 0.0208 0.2927 1.6 3q9t-a2-m1-cB_3q9t-a2-m1-cC
10 5lkm-a1-m2-cC 373 28 0.1587 0.0268 0.3571 2.8 5lkm-a1-m2-cC_5lkm-a1-m1-cA
11 5xti-a1-m1-cAW 419 56 0.2540 0.0382 0.2857 6.0 5xti-a1-m1-cAK_5xti-a1-m1-cAW
12 5xti-a1-m1-cAK 419 56 0.2540 0.0382 0.2857 6.0 5xti-a1-m1-cAK_5xti-a1-m1-cAW

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Reference:
Jacob Schwartz et al.

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