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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=27)
TSDVQDRLSALESRVQQQEDETVLKAA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4cgc-a1-m1-cC 28 27 1.0000 0.9643 1.0000 4.71e-12 4cgc-a1-m1-cA_4cgc-a1-m1-cC
2 4cgc-a1-m1-cA 27 27 1.0000 1.0000 1.0000 4.98e-12 4cgc-a1-m1-cA_4cgc-a1-m1-cC
3 4cgb-a2-m1-cF 45 26 0.6667 0.4000 0.6923 0.002 4cgb-a2-m1-cD_4cgb-a2-m1-cF, 4cgb-a2-m1-cE_4cgb-a2-m1-cF
4 4cgb-a2-m1-cD 45 26 0.6667 0.4000 0.6923 0.002 4cgb-a2-m1-cD_4cgb-a2-m1-cF
5 4cgb-a2-m1-cE 39 26 0.6667 0.4615 0.6923 0.003 4cgb-a2-m1-cE_4cgb-a2-m1-cF
6 8abv-a1-m3-cA 244 24 0.4074 0.0451 0.4583 0.12 8abv-a1-m2-cA_8abv-a1-m3-cA
7 8abv-a1-m2-cA 244 24 0.4074 0.0451 0.4583 0.12 8abv-a1-m2-cA_8abv-a1-m3-cA
8 4wle-a1-m1-cD 314 19 0.3333 0.0287 0.4737 5.3 4wle-a1-m1-cA_4wle-a1-m1-cD
9 4wle-a1-m1-cA 314 19 0.3333 0.0287 0.4737 5.3 4wle-a1-m1-cA_4wle-a1-m1-cD
10 1mld-a3-m1-cD 313 19 0.3333 0.0288 0.4737 8.3 1mld-a3-m1-cC_1mld-a3-m1-cD
11 1mld-a3-m1-cC 313 19 0.3333 0.0288 0.4737 8.3 1mld-a3-m1-cC_1mld-a3-m1-cD

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Reference:
Jacob Schwartz et al.

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