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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
TSDYIIEQIQRDQEEARKKVEEAEERLERVKEASKRGVSSDQLLDLIRELAEIIEELIRI
IRRSNEAIKELIKN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5j73-a2-m1-cC 74 74 1.0000 1.0000 1.0000 1.80e-43 5j73-a2-m1-cD_5j73-a2-m1-cC
2 5j73-a2-m1-cD 73 73 0.9865 1.0000 1.0000 2.13e-42 5j73-a2-m1-cD_5j73-a2-m1-cC
3 7l19-a2-m1-cB 122 44 0.1757 0.1066 0.2955 0.62 7l19-a2-m1-cB_7l19-a2-m1-cC
4 7l19-a2-m1-cC 129 44 0.1757 0.1008 0.2955 0.64 7l19-a2-m1-cB_7l19-a2-m1-cC
5 5j0k-a1-m1-cB 73 66 0.2838 0.2877 0.3182 1.0 5j0k-a1-m1-cB_5j0k-a1-m1-cA
6 5j0k-a1-m1-cA 74 61 0.2703 0.2703 0.3279 1.2 5j0k-a1-m1-cB_5j0k-a1-m1-cA
7 1abb-a1-m1-cD 823 32 0.1757 0.0158 0.4062 2.6 1abb-a1-m1-cA_1abb-a1-m1-cD, 1abb-a1-m1-cB_1abb-a1-m1-cD
8 1abb-a1-m1-cB 823 32 0.1757 0.0158 0.4062 2.6 1abb-a1-m1-cB_1abb-a1-m1-cD
9 1abb-a1-m1-cA 823 32 0.1757 0.0158 0.4062 2.6 1abb-a1-m1-cA_1abb-a1-m1-cD
10 3g67-a1-m1-cB 212 52 0.2432 0.0849 0.3462 2.6 3g67-a1-m1-cB_3g67-a1-m1-cA
11 4ctm-a1-m2-cA 807 32 0.1757 0.0161 0.4062 2.6 4ctm-a1-m1-cA_4ctm-a1-m2-cA
12 4ctm-a1-m1-cA 807 32 0.1757 0.0161 0.4062 2.6 4ctm-a1-m1-cA_4ctm-a1-m2-cA
13 3g67-a1-m1-cA 213 52 0.2432 0.0845 0.3462 2.6 3g67-a1-m1-cB_3g67-a1-m1-cA
14 4tvm-a1-m2-cA 380 60 0.1892 0.0368 0.2333 2.6 4tvm-a1-m1-cA_4tvm-a1-m2-cA
15 4tvm-a1-m1-cA 380 60 0.1892 0.0368 0.2333 2.6 4tvm-a1-m1-cA_4tvm-a1-m2-cA
16 5j2l-a1-m1-cB 76 58 0.2703 0.2632 0.3448 4.1 5j2l-a1-m1-cA_5j2l-a1-m1-cB
17 5j2l-a1-m1-cA 76 58 0.2703 0.2632 0.3448 4.1 5j2l-a1-m1-cA_5j2l-a1-m1-cB
18 7xnj-a1-m1-cD 68 55 0.2027 0.2206 0.2727 7.1 7xnj-a1-m1-cC_7xnj-a1-m1-cD, 7xnj-a1-m1-cD_7xnj-a1-m1-cB
19 7xnj-a1-m1-cB 69 55 0.2027 0.2174 0.2727 7.7 7xnj-a1-m1-cD_7xnj-a1-m1-cB
20 4lrt-a1-m1-cA 334 30 0.1757 0.0389 0.4333 7.8 4lrt-a1-m1-cA_4lrt-a1-m1-cC
21 4lrt-a1-m1-cC 335 30 0.1757 0.0388 0.4333 8.2 4lrt-a1-m1-cA_4lrt-a1-m1-cC
22 4kik-a1-m1-cB 648 29 0.1486 0.0170 0.3793 8.7 4kik-a1-m1-cA_4kik-a1-m1-cB
23 4l9a-a3-m1-cA 269 32 0.1622 0.0446 0.3750 9.3 4l9a-a3-m1-cB_4l9a-a3-m1-cA
24 4e3c-a3-m1-cE 624 29 0.1486 0.0176 0.3793 9.9 4e3c-a3-m1-cD_4e3c-a3-m1-cE
25 4e3c-a3-m1-cD 624 29 0.1486 0.0176 0.3793 9.9 4e3c-a3-m1-cD_4e3c-a3-m1-cE

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Reference:
Jacob Schwartz et al.

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