Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=72)
TSLIHSLIEESQNQQEKNEQELLELDGDGPQLLSGIVQQQNNLLRAIEAQQHLLQLTVWG
IKQLQARILAVE

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 2kp8-a1-m1-cC 72 72 1.0000 1.0000 1.0000 3.70e-44 2kp8-a1-m1-cB_2kp8-a1-m1-cC
2 2kp8-a1-m1-cB 72 72 1.0000 1.0000 1.0000 3.70e-44 2kp8-a1-m1-cB_2kp8-a1-m1-cC
3 7ska-a1-m1-cZ 142 42 0.5556 0.2817 0.9524 1.11e-20 7ska-a1-m1-cO_7ska-a1-m1-cZ
4 7ska-a1-m1-cZ 142 24 0.3194 0.1620 0.9583 7.60e-08 7ska-a1-m1-cO_7ska-a1-m1-cZ
5 7ska-a1-m1-cO 142 42 0.5556 0.2817 0.9524 1.11e-20 7ska-a1-m1-cO_7ska-a1-m1-cZ
6 7ska-a1-m1-cO 142 24 0.3194 0.1620 0.9583 7.60e-08 7ska-a1-m1-cO_7ska-a1-m1-cZ
7 3vgy-a1-m3-cC 49 40 0.5417 0.7959 0.9750 1.41e-20 3vgy-a1-m1-cC_3vgy-a1-m3-cC
8 3vgy-a1-m1-cC 49 40 0.5417 0.7959 0.9750 1.41e-20 3vgy-a1-m1-cC_3vgy-a1-m3-cC
9 4kht-a2-m3-cA 66 37 0.5139 0.5606 1.0000 3.94e-19 4kht-a2-m2-cA_4kht-a2-m3-cA
10 4kht-a2-m2-cA 66 37 0.5139 0.5606 1.0000 3.94e-19 4kht-a2-m2-cA_4kht-a2-m3-cA
11 5fyj-a1-m3-cB 154 42 0.5417 0.2532 0.9286 4.86e-19 5fyj-a1-m2-cB_5fyj-a1-m3-cB
12 5fyj-a1-m3-cB 154 23 0.2361 0.1104 0.7391 1.94e-04 5fyj-a1-m2-cB_5fyj-a1-m3-cB
13 5fyj-a1-m2-cB 154 42 0.5417 0.2532 0.9286 4.86e-19 5fyj-a1-m2-cB_5fyj-a1-m3-cB
14 5fyj-a1-m2-cB 154 23 0.2361 0.1104 0.7391 1.94e-04 5fyj-a1-m2-cB_5fyj-a1-m3-cB
15 7n6w-a1-m1-cC 585 41 0.5278 0.0650 0.9268 2.55e-18 7n6w-a1-m1-cC_7n6w-a1-m1-cA
16 7n6w-a1-m1-cC 585 23 0.2778 0.0342 0.8696 8.21e-06 7n6w-a1-m1-cC_7n6w-a1-m1-cA
17 7n6w-a1-m1-cA 591 41 0.5278 0.0643 0.9268 2.92e-18 7n6w-a1-m1-cC_7n6w-a1-m1-cA
18 7n6w-a1-m1-cA 591 25 0.3056 0.0372 0.8800 5.22e-07 7n6w-a1-m1-cC_7n6w-a1-m1-cA
19 3p7k-a2-m3-cA 45 40 0.4722 0.7556 0.8500 4.12e-17 3p7k-a2-m2-cA_3p7k-a2-m3-cA
20 3p7k-a2-m2-cA 45 40 0.4722 0.7556 0.8500 4.12e-17 3p7k-a2-m2-cA_3p7k-a2-m3-cA
21 5cn0-a1-m3-cA 70 35 0.4722 0.4857 0.9714 9.26e-17 5cn0-a1-m2-cA_5cn0-a1-m3-cA
22 5cn0-a1-m2-cA 70 35 0.4722 0.4857 0.9714 9.26e-17 5cn0-a1-m2-cA_5cn0-a1-m3-cA
23 3wfv-a1-m3-cA 86 44 0.4861 0.4070 0.7955 1.03e-16 3wfv-a1-m2-cA_3wfv-a1-m3-cA
24 3wfv-a1-m3-cA 86 25 0.2083 0.1744 0.6000 0.001 3wfv-a1-m2-cA_3wfv-a1-m3-cA
25 3wfv-a1-m2-cA 86 44 0.4861 0.4070 0.7955 1.03e-16 3wfv-a1-m2-cA_3wfv-a1-m3-cA
26 3wfv-a1-m2-cA 86 25 0.2083 0.1744 0.6000 0.001 3wfv-a1-m2-cA_3wfv-a1-m3-cA
27 3cp1-a1-m3-cA 73 36 0.4583 0.4521 0.9167 7.65e-16 3cp1-a1-m2-cA_3cp1-a1-m3-cA
28 3cp1-a1-m3-cA 73 24 0.3333 0.3288 1.0000 2.53e-08 3cp1-a1-m2-cA_3cp1-a1-m3-cA
29 3cp1-a1-m2-cA 73 36 0.4583 0.4521 0.9167 7.65e-16 3cp1-a1-m2-cA_3cp1-a1-m3-cA
30 3cp1-a1-m2-cA 73 24 0.3333 0.3288 1.0000 2.53e-08 3cp1-a1-m2-cA_3cp1-a1-m3-cA
31 2zfc-a1-m1-cC 44 40 0.3889 0.6364 0.7000 2.21e-14 2zfc-a1-m1-cA_2zfc-a1-m1-cC
32 2zfc-a1-m1-cA 44 40 0.3889 0.6364 0.7000 2.21e-14 2zfc-a1-m1-cA_2zfc-a1-m1-cC
33 3k9a-a1-m3-cA 82 30 0.4028 0.3537 0.9667 3.43e-13 3k9a-a1-m2-cA_3k9a-a1-m3-cA
34 3k9a-a1-m3-cA 82 26 0.2917 0.2561 0.8077 8.89e-07 3k9a-a1-m2-cA_3k9a-a1-m3-cA
35 3k9a-a1-m2-cA 82 30 0.4028 0.3537 0.9667 3.43e-13 3k9a-a1-m2-cA_3k9a-a1-m3-cA
36 3k9a-a1-m2-cA 82 26 0.2917 0.2561 0.8077 8.89e-07 3k9a-a1-m2-cA_3k9a-a1-m3-cA
37 6nij-a1-m1-cB 140 41 0.4583 0.2357 0.8049 6.08e-13 6nij-a1-m1-cF_6nij-a1-m1-cB
38 6nij-a1-m1-cB 140 26 0.3194 0.1643 0.8846 1.38e-08 6nij-a1-m1-cF_6nij-a1-m1-cB
39 7mxd-a1-m1-cI 136 42 0.4444 0.2353 0.7619 3.14e-12 7mxd-a1-m1-cB_7mxd-a1-m1-cI
40 7mxd-a1-m1-cB 136 42 0.4444 0.2353 0.7619 3.14e-12 7mxd-a1-m1-cB_7mxd-a1-m1-cI
41 6nij-a1-m1-cF 139 41 0.4444 0.2302 0.7805 4.74e-12 6nij-a1-m1-cF_6nij-a1-m1-cB
42 6nij-a1-m1-cF 139 26 0.3194 0.1655 0.8846 1.51e-08 6nij-a1-m1-cF_6nij-a1-m1-cB
43 7ucg-a1-m1-cM 134 42 0.3889 0.2090 0.6667 9.39e-10 7ucg-a1-m1-cB_7ucg-a1-m1-cM
44 7ucg-a1-m1-cM 134 26 0.2500 0.1343 0.6923 7.97e-05 7ucg-a1-m1-cB_7ucg-a1-m1-cM
45 7ucg-a1-m1-cB 134 42 0.3889 0.2090 0.6667 9.39e-10 7ucg-a1-m1-cB_7ucg-a1-m1-cM
46 7ucg-a1-m1-cB 134 26 0.2500 0.1343 0.6923 7.97e-05 7ucg-a1-m1-cB_7ucg-a1-m1-cM
47 6ccb-a2-m5-cB 131 42 0.3750 0.2061 0.6429 2.42e-08 6ccb-a2-m3-cB_6ccb-a2-m5-cB
48 6ccb-a2-m5-cB 131 26 0.2639 0.1450 0.7308 3.86e-05 6ccb-a2-m3-cB_6ccb-a2-m5-cB
49 6ccb-a2-m3-cB 131 42 0.3750 0.2061 0.6429 2.42e-08 6ccb-a2-m3-cB_6ccb-a2-m5-cB
50 6ccb-a2-m3-cB 131 26 0.2639 0.1450 0.7308 3.86e-05 6ccb-a2-m3-cB_6ccb-a2-m5-cB
51 6vo3-a1-m1-cF 124 26 0.3056 0.1774 0.8462 9.69e-08 6vo3-a1-m1-cE_6vo3-a1-m1-cF
52 6vo3-a1-m1-cF 124 42 0.3194 0.1855 0.5476 1.42e-04 6vo3-a1-m1-cE_6vo3-a1-m1-cF
53 6vo3-a1-m1-cE 124 26 0.3056 0.1774 0.8462 9.69e-08 6vo3-a1-m1-cE_6vo3-a1-m1-cF
54 6vo3-a1-m1-cE 124 42 0.3194 0.1855 0.5476 1.42e-04 6vo3-a1-m1-cE_6vo3-a1-m1-cF
55 6dcq-a1-m1-cF 139 42 0.3750 0.1942 0.6429 1.37e-07 6dcq-a1-m1-cB_6dcq-a1-m1-cF
56 6dcq-a1-m1-cF 139 25 0.2222 0.1151 0.6400 0.004 6dcq-a1-m1-cB_6dcq-a1-m1-cF
57 6wix-a1-m3-cB 120 24 0.2778 0.1667 0.8333 1.87e-07 6wix-a1-m2-cB_6wix-a1-m3-cB
58 6wix-a1-m3-cB 120 25 0.2500 0.1500 0.7200 0.013 6wix-a1-m2-cB_6wix-a1-m3-cB
59 6wix-a1-m2-cB 120 24 0.2778 0.1667 0.8333 1.87e-07 6wix-a1-m2-cB_6wix-a1-m3-cB
60 6wix-a1-m2-cB 120 25 0.2500 0.1500 0.7200 0.013 6wix-a1-m2-cB_6wix-a1-m3-cB
61 7rso-a1-m1-cF 124 25 0.3056 0.1774 0.8800 3.23e-07 7rso-a1-m1-cE_7rso-a1-m1-cF
62 7rso-a1-m1-cF 124 27 0.2639 0.1532 0.7037 4.05e-06 7rso-a1-m1-cE_7rso-a1-m1-cF
63 7rso-a1-m1-cE 124 25 0.3056 0.1774 0.8800 3.23e-07 7rso-a1-m1-cE_7rso-a1-m1-cF
64 7rso-a1-m1-cE 124 27 0.2639 0.1532 0.7037 4.05e-06 7rso-a1-m1-cE_7rso-a1-m1-cF
65 6ohy-a1-m1-cF 120 26 0.2500 0.1500 0.6923 7.69e-06 6ohy-a1-m1-cF_6ohy-a1-m1-cE
66 6ohy-a1-m1-cF 120 17 0.2083 0.1250 0.8824 0.001 6ohy-a1-m1-cF_6ohy-a1-m1-cE
67 6ohy-a1-m1-cE 120 26 0.2500 0.1500 0.6923 7.69e-06 6ohy-a1-m1-cF_6ohy-a1-m1-cE
68 6ohy-a1-m1-cE 120 17 0.2083 0.1250 0.8824 0.001 6ohy-a1-m1-cF_6ohy-a1-m1-cE
69 6mzj-a1-m1-cE 550 25 0.2500 0.0327 0.7200 9.49e-06 6mzj-a1-m1-cB_6mzj-a1-m1-cE
70 6mzj-a1-m1-cE 550 26 0.2222 0.0291 0.6154 3.35e-04 6mzj-a1-m1-cB_6mzj-a1-m1-cE
71 6mzj-a1-m1-cB 550 25 0.2500 0.0327 0.7200 9.49e-06 6mzj-a1-m1-cB_6mzj-a1-m1-cE
72 6mzj-a1-m1-cB 550 26 0.2222 0.0291 0.6154 3.35e-04 6mzj-a1-m1-cB_6mzj-a1-m1-cE
73 7ur6-a1-m1-cI 132 27 0.2361 0.1288 0.6296 0.001 7ur6-a1-m1-cC_7ur6-a1-m1-cI
74 7ur6-a1-m1-cI 132 26 0.2361 0.1288 0.6538 0.002 7ur6-a1-m1-cC_7ur6-a1-m1-cI
75 7ur6-a1-m1-cC 132 27 0.2361 0.1288 0.6296 0.001 7ur6-a1-m1-cC_7ur6-a1-m1-cI
76 7ur6-a1-m1-cC 132 26 0.2361 0.1288 0.6538 0.002 7ur6-a1-m1-cC_7ur6-a1-m1-cI
77 6p65-a1-m1-cE 557 23 0.1944 0.0251 0.6087 0.002 6p65-a1-m1-cE_6p65-a1-m1-cB
78 6p65-a1-m1-cE 557 27 0.2222 0.0287 0.5926 0.010 6p65-a1-m1-cE_6p65-a1-m1-cB
79 6p65-a1-m1-cB 557 23 0.1944 0.0251 0.6087 0.002 6p65-a1-m1-cE_6p65-a1-m1-cB
80 6p65-a1-m1-cB 557 27 0.2222 0.0287 0.5926 0.010 6p65-a1-m1-cE_6p65-a1-m1-cB
81 1jq0-a1-m3-cA 71 34 0.3056 0.3099 0.6471 0.005 1jq0-a1-m2-cA_1jq0-a1-m3-cA
82 1jq0-a1-m2-cA 71 34 0.3056 0.3099 0.6471 0.005 1jq0-a1-m2-cA_1jq0-a1-m3-cA
83 1jpx-a1-m3-cA 59 29 0.2639 0.3220 0.6552 0.067 1jpx-a1-m2-cA_1jpx-a1-m3-cA
84 1jpx-a1-m2-cA 59 29 0.2639 0.3220 0.6552 0.067 1jpx-a1-m2-cA_1jpx-a1-m3-cA
85 6dcq-a1-m1-cB 122 13 0.1667 0.0984 0.9231 0.57 6dcq-a1-m1-cB_6dcq-a1-m1-cF
86 6dcq-a1-m1-cB 122 16 0.1528 0.0902 0.6875 6.2 6dcq-a1-m1-cB_6dcq-a1-m1-cF
87 6wt5-a2-m1-cC 150 51 0.2500 0.1200 0.3529 0.58 6wt5-a2-m1-cD_6wt5-a2-m1-cC
88 6nqd-a1-m1-cF 124 13 0.1667 0.0968 0.9231 0.60 6nqd-a1-m1-cB_6nqd-a1-m1-cF
89 6nqd-a1-m1-cF 124 22 0.1667 0.0968 0.5455 1.8 6nqd-a1-m1-cB_6nqd-a1-m1-cF
90 6nqd-a1-m1-cB 124 13 0.1667 0.0968 0.9231 0.60 6nqd-a1-m1-cB_6nqd-a1-m1-cF
91 6nqd-a1-m1-cB 124 22 0.1667 0.0968 0.5455 1.8 6nqd-a1-m1-cB_6nqd-a1-m1-cF
92 1kpt-a1-m1-cB 105 30 0.1528 0.1048 0.3667 2.6 1kpt-a1-m1-cA_1kpt-a1-m1-cB
93 1kpt-a1-m1-cA 105 30 0.1528 0.1048 0.3667 2.6 1kpt-a1-m1-cA_1kpt-a1-m1-cB
94 8dua-a1-m1-cF 91 15 0.1250 0.0989 0.6000 3.2 8dua-a1-m1-cB_8dua-a1-m1-cF
95 8dua-a1-m1-cB 91 15 0.1250 0.0989 0.6000 3.2 8dua-a1-m1-cB_8dua-a1-m1-cF
96 5mlt-a1-m2-cA 447 27 0.1528 0.0246 0.4074 4.1 5mlt-a1-m1-cA_5mlt-a1-m2-cA
97 5mlt-a1-m1-cA 447 27 0.1528 0.0246 0.4074 4.1 5mlt-a1-m1-cA_5mlt-a1-m2-cA
98 5zwb-a1-m1-cB 268 40 0.2083 0.0560 0.3750 4.5 5zwb-a1-m1-cB_5zwb-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600