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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=70)
TSLYEIQLNYKYENIQLRNFPFGGDIIFVRIIRNNESIVPHGDTQLRYGDRLIVTGAKEY
VDELKQELEF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5f29-a1-m1-cB 70 70 1.0000 1.0000 1.0000 1.05e-46 5f29-a1-m1-cA_5f29-a1-m1-cB
2 5f29-a1-m1-cA 69 69 0.9857 1.0000 1.0000 7.47e-46 5f29-a1-m1-cA_5f29-a1-m1-cB
3 3jxo-a2-m1-cA 84 51 0.3000 0.2500 0.4118 1.88e-05 3jxo-a2-m1-cA_3jxo-a2-m2-cB
4 3jxo-a2-m2-cB 85 51 0.3000 0.2471 0.4118 2.16e-05 3jxo-a2-m1-cA_3jxo-a2-m2-cB
5 3l4b-a1-m1-cH 205 59 0.2857 0.0976 0.3390 0.008 3l4b-a1-m1-cH_3l4b-a1-m1-cG
6 3l4b-a1-m1-cG 211 51 0.2714 0.0900 0.3725 0.055 3l4b-a1-m1-cH_3l4b-a1-m1-cG
7 5zm7-a1-m3-cA 366 35 0.1857 0.0355 0.3714 1.5 5zm7-a1-m2-cA_5zm7-a1-m3-cA
8 5zm7-a1-m2-cA 366 35 0.1857 0.0355 0.3714 1.5 5zm7-a1-m2-cA_5zm7-a1-m3-cA
9 2ce7-a2-m2-cE 405 31 0.1714 0.0296 0.3871 4.3 2ce7-a2-m2-cE_2ce7-a2-m2-cD, 2ce7-a2-m2-cE_2ce7-a2-m2-cF
10 2ce7-a2-m2-cD 413 31 0.1714 0.0291 0.3871 4.7 2ce7-a2-m2-cE_2ce7-a2-m2-cD
11 2ce7-a2-m1-cD 413 31 0.1714 0.0291 0.3871 4.7 2ce7-a2-m2-cF_2ce7-a2-m1-cD
12 2ce7-a2-m2-cF 412 31 0.1714 0.0291 0.3871 4.8 2ce7-a2-m2-cE_2ce7-a2-m2-cF, 2ce7-a2-m2-cF_2ce7-a2-m1-cD
13 3grd-a1-m1-cB 128 27 0.1571 0.0859 0.4074 9.3 3grd-a1-m1-cA_3grd-a1-m1-cB
14 3grd-a1-m1-cA 128 27 0.1571 0.0859 0.4074 9.3 3grd-a1-m1-cA_3grd-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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