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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
TSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK
KTRIVPRHIQLAVRNDEELSKLLGDVTI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6m2m-a1-m1-cA 88 88 1.0000 1.0000 1.0000 6.20e-59 6m2m-a1-m1-cK_6m2m-a1-m1-cA
2 6m2m-a1-m1-cK 81 81 0.9205 1.0000 1.0000 9.98e-54 6m2m-a1-m1-cK_6m2m-a1-m1-cA
3 2xql-a1-m1-cI 91 87 0.8295 0.8022 0.8391 1.87e-50 2xql-a1-m1-cG_2xql-a1-m1-cI
4 2xql-a1-m1-cG 91 87 0.8295 0.8022 0.8391 1.87e-50 2xql-a1-m1-cG_2xql-a1-m1-cI
5 6y5e-a1-m1-cC 107 87 0.8182 0.6729 0.8276 4.42e-50 6y5e-a1-m1-cC_6y5e-a1-m1-cG
6 6y5e-a1-m1-cG 108 87 0.8182 0.6667 0.8276 4.66e-50 6y5e-a1-m1-cC_6y5e-a1-m1-cG
7 7v96-a1-m1-cM 119 87 0.8068 0.5966 0.8161 1.90e-49 7v96-a1-m1-cM_7v96-a1-m1-cG
8 7v9k-a1-m1-cg 120 87 0.8068 0.5917 0.8161 2.21e-49 7v9k-a1-m1-cU_7v9k-a1-m1-cg
9 7v96-a1-m1-cG 120 87 0.8068 0.5917 0.8161 2.21e-49 7v96-a1-m1-cM_7v96-a1-m1-cG
10 7v9k-a1-m1-cU 109 87 0.8068 0.6514 0.8161 3.04e-49 7v9k-a1-m1-cU_7v9k-a1-m1-cg
11 3waa-a1-m1-cG 104 83 0.6250 0.5288 0.6627 1.55e-31 3waa-a1-m1-cG_3waa-a1-m1-cC
12 3waa-a1-m1-cC 107 83 0.6250 0.5140 0.6627 1.78e-31 3waa-a1-m1-cG_3waa-a1-m1-cC
13 3ksy-a2-m2-cA 1007 81 0.2841 0.0248 0.3086 6.07e-06 3ksy-a2-m1-cA_3ksy-a2-m2-cA
14 3ksy-a2-m1-cA 1007 81 0.2841 0.0248 0.3086 6.07e-06 3ksy-a2-m1-cA_3ksy-a2-m2-cA
15 5t5k-a1-m1-cF 67 67 0.2727 0.3582 0.3582 0.006 5t5k-a1-m1-cD_5t5k-a1-m1-cF, 5t5k-a1-m1-cE_5t5k-a1-m1-cF
16 5t5k-a1-m1-cE 67 67 0.2727 0.3582 0.3582 0.006 5t5k-a1-m1-cE_5t5k-a1-m1-cF
17 5t5k-a1-m1-cD 67 67 0.2727 0.3582 0.3582 0.006 5t5k-a1-m1-cD_5t5k-a1-m1-cF
18 1b67-a1-m1-cB 65 64 0.2614 0.3538 0.3594 0.17 1b67-a1-m1-cB_1b67-a1-m1-cA
19 1b67-a1-m1-cA 68 64 0.2614 0.3382 0.3594 0.22 1b67-a1-m1-cB_1b67-a1-m1-cA
20 6m2m-a1-m1-cL 89 39 0.1932 0.1910 0.4359 1.2 6m2m-a1-m1-cB_6m2m-a1-m1-cL
21 6m2m-a1-m1-cB 86 39 0.1932 0.1977 0.4359 1.5 6m2m-a1-m1-cB_6m2m-a1-m1-cL
22 1zbb-a1-m2-ch 99 40 0.1705 0.1515 0.3750 6.7 1zbb-a1-m1-cH_1zbb-a1-m2-ch
23 1zbb-a1-m1-cH 99 40 0.1705 0.1515 0.3750 6.7 1zbb-a1-m1-cH_1zbb-a1-m2-ch
24 3c9k-a1-m9-cF 90 40 0.1591 0.1556 0.3500 7.1 3c9k-a1-m8-cB_3c9k-a1-m9-cF
25 3c9k-a1-m8-cB 90 40 0.1591 0.1556 0.3500 7.1 3c9k-a1-m8-cB_3c9k-a1-m9-cF
26 6gbu-a1-m1-cE 42 23 0.1136 0.2381 0.4348 8.4 6gbu-a1-m1-cE_6gbu-a1-m1-cG

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Reference:
Jacob Schwartz et al.

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