Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=91)
TSSHTVLLIQTSPRLDSRTWGDYESVTDALDALCKMFEDFLSVTYDVSQVYEFLDKLSDV
SMMIFNRETGQYIGRTRAWIKQQVYEMMRGR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7o6l-a1-m1-cA 91 91 1.0000 1.0000 1.0000 1.22e-64 7o6l-a1-m1-cB_7o6l-a1-m1-cA
2 7o6l-a1-m1-cB 86 88 0.9451 1.0000 0.9773 6.68e-59 7o6l-a1-m1-cB_7o6l-a1-m1-cA
3 7x39-a1-m1-cB 117 95 0.4066 0.3162 0.3895 1.33e-24 7x39-a1-m1-cB_7x39-a1-m1-cA
4 7x39-a1-m1-cA 128 95 0.4066 0.2891 0.3895 1.45e-24 7x39-a1-m1-cB_7x39-a1-m1-cA
5 6s2w-a1-m2-cA 87 88 0.2418 0.2529 0.2500 1.61e-08 6s2w-a1-m1-cA_6s2w-a1-m2-cA
6 6s2w-a1-m1-cA 87 88 0.2418 0.2529 0.2500 1.61e-08 6s2w-a1-m1-cA_6s2w-a1-m2-cA
7 3dby-a9-m3-cP 266 63 0.2198 0.0752 0.3175 0.012 3dby-a9-m2-cP_3dby-a9-m3-cP
8 3dby-a9-m2-cP 266 63 0.2198 0.0752 0.3175 0.012 3dby-a9-m2-cP_3dby-a9-m3-cP
9 3dby-a8-m5-cD 266 63 0.2198 0.0752 0.3175 0.012 3dby-a8-m5-cD_3dby-a8-m4-cC, 3dby-a8-m5-cD_3dby-a8-m5-cC
10 3dby-a8-m5-cC 267 63 0.2198 0.0749 0.3175 0.012 3dby-a8-m5-cD_3dby-a8-m5-cC
11 3dby-a8-m4-cC 267 63 0.2198 0.0749 0.3175 0.012 3dby-a8-m5-cD_3dby-a8-m4-cC
12 4q5f-a1-m1-cD 206 56 0.1758 0.0777 0.2857 4.0 4q5f-a1-m1-cA_4q5f-a1-m1-cD
13 4q5f-a1-m1-cA 205 56 0.1758 0.0780 0.2857 4.2 4q5f-a1-m1-cA_4q5f-a1-m1-cD
14 6rjr-a1-m1-cB 501 48 0.1429 0.0259 0.2708 8.4 6rjr-a1-m1-cB_6rjr-a1-m1-cD
15 6rjr-a1-m1-cD 502 48 0.1429 0.0259 0.2708 8.4 6rjr-a1-m1-cB_6rjr-a1-m1-cD, 6rjr-a1-m1-cC_6rjr-a1-m1-cD, 6rjr-a1-m1-cD_6rjr-a1-m1-cA
16 6rjr-a1-m1-cA 505 48 0.1429 0.0257 0.2708 8.4 6rjr-a1-m1-cD_6rjr-a1-m1-cA
17 5tgc-a3-m1-cE 391 56 0.1868 0.0435 0.3036 8.4 5tgc-a3-m1-cE_5tgc-a3-m1-cB
18 6rjr-a1-m1-cC 500 48 0.1429 0.0260 0.2708 8.6 6rjr-a1-m1-cC_6rjr-a1-m1-cD
19 4hi4-a2-m2-cA 119 34 0.1099 0.0840 0.2941 9.3 4hi4-a2-m1-cG_4hi4-a2-m2-cA
20 4hi4-a2-m1-cG 119 34 0.1099 0.0840 0.2941 9.3 4hi4-a2-m1-cG_4hi4-a2-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600