Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
TSSQIKHASAVVSAPKDIAVAIGYMPEKYKAPWIIAMGVNLRAKRIIAEAEKYGVPIMRN
VPLAHQLLDEGKELKFIPETTYEAVGEILLYITS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3t7y-a1-m1-cB 94 94 1.0000 1.0000 1.0000 8.98e-65 3t7y-a1-m1-cA_3t7y-a1-m1-cB
2 3t7y-a1-m1-cA 94 94 1.0000 1.0000 1.0000 8.98e-65 3t7y-a1-m1-cA_3t7y-a1-m1-cB
3 3bzl-a3-m1-cD 82 75 0.2340 0.2683 0.2933 1.98e-06 3bzl-a3-m1-cC_3bzl-a3-m1-cD
4 3bzl-a3-m1-cC 81 75 0.2340 0.2716 0.2933 2.07e-06 3bzl-a3-m1-cC_3bzl-a3-m1-cD
5 2w0r-a1-m2-cA 122 88 0.2766 0.2131 0.2955 4.10e-06 2w0r-a1-m1-cA_2w0r-a1-m2-cA
6 2w0r-a1-m1-cA 122 88 0.2766 0.2131 0.2955 4.10e-06 2w0r-a1-m1-cA_2w0r-a1-m2-cA
7 3bzo-a4-m3-cB 82 72 0.2234 0.2561 0.2917 9.93e-06 3bzo-a4-m1-cB_3bzo-a4-m3-cB
8 3bzo-a4-m1-cB 82 72 0.2234 0.2561 0.2917 9.93e-06 3bzo-a4-m1-cB_3bzo-a4-m3-cB
9 3bzo-a2-m4-cB 82 72 0.2234 0.2561 0.2917 9.93e-06 3bzo-a2-m3-cB_3bzo-a2-m4-cB
10 3bzo-a2-m3-cB 82 72 0.2234 0.2561 0.2917 9.93e-06 3bzo-a2-m3-cB_3bzo-a2-m4-cB
11 7etb-a1-m2-cC 253 23 0.1170 0.0435 0.4783 8.5 7etb-a1-m1-cB_7etb-a1-m2-cC, 7etb-a1-m1-cC_7etb-a1-m2-cC, 7etb-a1-m2-cB_7etb-a1-m2-cC
12 7etb-a1-m2-cB 253 23 0.1170 0.0435 0.4783 8.5 7etb-a1-m2-cB_7etb-a1-m2-cC
13 7etb-a1-m1-cC 253 23 0.1170 0.0435 0.4783 8.5 7etb-a1-m1-cC_7etb-a1-m2-cC
14 7etb-a1-m1-cB 253 23 0.1170 0.0435 0.4783 8.5 7etb-a1-m1-cB_7etb-a1-m2-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600