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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=35)
TSSVLRSPMPGVVVAVSVKPGDAVAEGQEICVIEA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2jku-a1-m2-cA 35 35 1.0000 1.0000 1.0000 4.03e-18 2jku-a1-m1-cA_2jku-a1-m2-cA
2 2jku-a1-m1-cA 35 35 1.0000 1.0000 1.0000 4.03e-18 2jku-a1-m1-cA_2jku-a1-m2-cA
3 5ks8-a1-m1-cC 603 29 0.4000 0.0232 0.4828 0.025 5ks8-a1-m1-cD_5ks8-a1-m1-cC
4 5ks8-a1-m1-cC 603 24 0.3143 0.0182 0.4583 2.8 5ks8-a1-m1-cD_5ks8-a1-m1-cC
5 5ks8-a1-m1-cD 580 29 0.4000 0.0241 0.4828 0.025 5ks8-a1-m1-cD_5ks8-a1-m1-cC
6 5ks8-a1-m1-cD 580 24 0.3143 0.0190 0.4583 2.8 5ks8-a1-m1-cD_5ks8-a1-m1-cC
7 3hbl-a1-m1-cB 1074 32 0.3143 0.0102 0.3438 0.59 3hbl-a1-m1-cB_3hbl-a1-m1-cA
8 3hbl-a1-m1-cA 1131 32 0.3143 0.0097 0.3438 0.62 3hbl-a1-m1-cB_3hbl-a1-m1-cA
9 4jrq-a3-m1-cB 459 21 0.2286 0.0174 0.3810 4.7 4jrq-a3-m1-cB_4jrq-a3-m1-cA
10 4jrq-a3-m1-cA 460 21 0.2286 0.0174 0.3810 4.7 4jrq-a3-m1-cB_4jrq-a3-m1-cA

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Reference:
Jacob Schwartz et al.

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