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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
TSTFDRVATIIAETCDIPRETITPESHAIDDLGIDSLDFLDIAFAIDKAFGIKLPLEKWT
QEVNDGKATTEQYFVLKNLAARIDELVAAKGALE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3lmo-a1-m2-cA 94 94 1.0000 1.0000 1.0000 2.39e-64 3lmo-a1-m1-cA_3lmo-a1-m2-cA
2 3lmo-a1-m1-cA 94 94 1.0000 1.0000 1.0000 2.39e-64 3lmo-a1-m1-cA_3lmo-a1-m2-cA
3 5zwt-a1-m1-cB 83 50 0.1809 0.2048 0.3400 1.86e-06 5zwt-a1-m1-cA_5zwt-a1-m1-cB
4 5zwt-a1-m1-cA 83 50 0.1809 0.2048 0.3400 1.86e-06 5zwt-a1-m1-cA_5zwt-a1-m1-cB
5 2fae-a8-m5-cB 77 54 0.1915 0.2338 0.3333 4.86e-06 2fae-a8-m1-cA_2fae-a8-m5-cB
6 2fae-a8-m1-cA 77 54 0.1915 0.2338 0.3333 4.86e-06 2fae-a8-m1-cA_2fae-a8-m5-cB
7 2fae-a3-m4-cB 77 54 0.1915 0.2338 0.3333 4.86e-06 2fae-a3-m1-cA_2fae-a3-m4-cB
8 2fae-a3-m1-cA 77 54 0.1915 0.2338 0.3333 4.86e-06 2fae-a3-m1-cA_2fae-a3-m4-cB
9 2fad-a3-m2-cB 77 54 0.1915 0.2338 0.3333 4.86e-06 2fad-a3-m1-cA_2fad-a3-m2-cB
10 2fad-a3-m1-cA 77 54 0.1915 0.2338 0.3333 4.86e-06 2fad-a3-m1-cA_2fad-a3-m2-cB
11 3gzl-a1-m2-cA 81 54 0.1809 0.2099 0.3148 5.88e-05 3gzl-a1-m1-cA_3gzl-a1-m2-cA
12 3gzl-a1-m1-cA 81 54 0.1809 0.2099 0.3148 5.88e-05 3gzl-a1-m1-cA_3gzl-a1-m2-cA
13 2x2b-a1-m2-cA 76 55 0.1596 0.1974 0.2727 0.15 2x2b-a1-m1-cA_2x2b-a1-m2-cA
14 2x2b-a1-m1-cA 76 55 0.1596 0.1974 0.2727 0.15 2x2b-a1-m1-cA_2x2b-a1-m2-cA
15 5ytq-a2-m2-cC 66 37 0.1489 0.2121 0.3784 0.15 5ytq-a2-m1-cC_5ytq-a2-m2-cC
16 5ytq-a2-m1-cC 66 37 0.1489 0.2121 0.3784 0.15 5ytq-a2-m1-cC_5ytq-a2-m2-cC
17 4wj0-a1-m1-cA 315 43 0.1702 0.0508 0.3721 1.8 4wj0-a1-m1-cB_4wj0-a1-m1-cA
18 4wj0-a1-m1-cB 309 43 0.1702 0.0518 0.3721 1.8 4wj0-a1-m1-cB_4wj0-a1-m1-cA
19 2zci-a2-m1-cD 578 46 0.1489 0.0242 0.3043 1.9 2zci-a2-m1-cD_2zci-a2-m1-cB
20 3mvp-a1-m1-cB 193 37 0.1383 0.0674 0.3514 7.4 3mvp-a1-m1-cB_3mvp-a1-m1-cA
21 6lk3-a1-m1-cB 79 35 0.1064 0.1266 0.2857 7.7 6lk3-a1-m1-cA_6lk3-a1-m1-cB
22 3mvp-a1-m1-cA 203 37 0.1383 0.0640 0.3514 7.7 3mvp-a1-m1-cB_3mvp-a1-m1-cA
23 6lk3-a1-m1-cA 72 35 0.1064 0.1389 0.2857 8.9 6lk3-a1-m1-cA_6lk3-a1-m1-cB
24 6sm4-a1-m1-cA 78 56 0.1383 0.1667 0.2321 8.9 6sm4-a1-m1-cB_6sm4-a1-m1-cA
25 6ubl-a1-m1-cB 211 49 0.1489 0.0664 0.2857 8.9 6ubl-a1-m1-cA_6ubl-a1-m1-cB
26 6ubl-a1-m1-cA 211 49 0.1489 0.0664 0.2857 8.9 6ubl-a1-m1-cA_6ubl-a1-m1-cB
27 6sm4-a1-m1-cB 77 56 0.1383 0.1688 0.2321 9.5 6sm4-a1-m1-cB_6sm4-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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