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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=60)
TSVPTNQSVWGNVSTGLDALISGWARVEQIKAAKASTGQGRVEQAMTPELDNGAAVVVEA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2w0c-a1-m9-cQ 60 60 1.0000 1.0000 1.0000 1.07e-37 2w0c-a1-m9-cQ_2w0c-a1-m9-cP
2 2w0c-a1-m9-cP 65 59 0.9833 0.9077 1.0000 4.12e-37 2w0c-a1-m54-cP_2w0c-a1-m9-cP, 2w0c-a1-m9-cQ_2w0c-a1-m9-cP
3 2w0c-a1-m54-cP 65 59 0.9833 0.9077 1.0000 4.12e-37 2w0c-a1-m54-cP_2w0c-a1-m9-cP
4 7eme-a1-m1-cB 412 50 0.3000 0.0437 0.3600 1.6 7eme-a1-m1-cB_7eme-a1-m1-cA
5 3tsy-a1-m2-cA 828 33 0.1833 0.0133 0.3333 4.2 3tsy-a1-m1-cA_3tsy-a1-m2-cA
6 3tsy-a1-m1-cA 828 33 0.1833 0.0133 0.3333 4.2 3tsy-a1-m1-cA_3tsy-a1-m2-cA
7 4i95-a1-m2-cB 133 45 0.2167 0.0977 0.2889 6.2 4i95-a1-m1-cA_4i95-a1-m2-cB, 4i95-a1-m2-cA_4i95-a1-m2-cB
8 4i95-a1-m2-cA 133 45 0.2167 0.0977 0.2889 6.2 4i95-a1-m2-cA_4i95-a1-m2-cB
9 4i95-a1-m1-cA 133 45 0.2167 0.0977 0.2889 6.2 4i95-a1-m1-cA_4i95-a1-m2-cB
10 7bjt-a1-m1-cB 727 18 0.1333 0.0110 0.4444 6.2 7bjt-a1-m1-cA_7bjt-a1-m1-cB
11 7bjt-a1-m1-cA 727 18 0.1333 0.0110 0.4444 6.2 7bjt-a1-m1-cA_7bjt-a1-m1-cB
12 2qea-a3-m5-cB 153 33 0.1667 0.0654 0.3030 8.6 2qea-a3-m5-cB_2qea-a3-m3-cC, 2qea-a3-m5-cB_2qea-a3-m4-cC, 2qea-a3-m5-cB_2qea-a3-m5-cA
13 7q5s-a1-m1-cK 2039 42 0.2500 0.0074 0.3571 9.4 7q5s-a1-m1-cI_7q5s-a1-m1-cK
14 7q5s-a1-m1-cI 2039 42 0.2500 0.0074 0.3571 9.4 7q5s-a1-m1-cI_7q5s-a1-m1-cK

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Reference:
Jacob Schwartz et al.

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