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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=63)
TTEEELLRKLNEQRDILALMEVKMKEMKGSIRHLRLTEAKLREELREKDRLLAMAVIRKK
HGM

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5ajs-a2-m1-cA 63 63 1.0000 1.0000 1.0000 2.65e-37 5ajs-a2-m1-cA_5ajs-a2-m1-cB
2 5ajs-a2-m1-cB 64 63 1.0000 0.9844 1.0000 3.00e-37 5ajs-a2-m1-cA_5ajs-a2-m1-cB
3 3djl-a1-m4-cA 538 43 0.2063 0.0242 0.3023 1.8 3djl-a1-m1-cA_3djl-a1-m4-cA, 3djl-a1-m2-cA_3djl-a1-m4-cA, 3djl-a1-m3-cA_3djl-a1-m4-cA
4 3djl-a1-m3-cA 538 43 0.2063 0.0242 0.3023 1.8 3djl-a1-m3-cA_3djl-a1-m4-cA
5 3djl-a1-m2-cA 538 43 0.2063 0.0242 0.3023 1.8 3djl-a1-m2-cA_3djl-a1-m4-cA
6 3djl-a1-m1-cA 538 43 0.2063 0.0242 0.3023 1.8 3djl-a1-m1-cA_3djl-a1-m4-cA
7 7c1k-a2-m1-cA 409 34 0.1587 0.0244 0.2941 1.8 7c1k-a2-m1-cD_7c1k-a2-m1-cA
8 7c1k-a2-m1-cD 399 31 0.1587 0.0251 0.3226 3.3 7c1k-a2-m1-cD_7c1k-a2-m1-cA
9 3e7j-a1-m1-cB 743 39 0.2222 0.0188 0.3590 6.2 3e7j-a1-m1-cA_3e7j-a1-m1-cB
10 3e7j-a1-m1-cA 743 39 0.2222 0.0188 0.3590 6.2 3e7j-a1-m1-cA_3e7j-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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