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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
TTFAARLNRLFDTVYPPGRGPHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGATMA
ALANFFRIKAAYFTDDEYYEKLDKELQWLCTMR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3qyx-a1-m1-cB 131 93 1.0000 0.7099 1.0000 8.25e-67 3qyx-a1-m1-cA_3qyx-a1-m1-cB
2 3qyx-a1-m1-cA 131 93 1.0000 0.7099 1.0000 8.25e-67 3qyx-a1-m1-cA_3qyx-a1-m1-cB
3 3qwg-a3-m1-cA 93 93 1.0000 1.0000 1.0000 1.02e-66 3qwg-a3-m2-cB_3qwg-a3-m1-cA
4 3qwg-a3-m2-cB 90 90 0.9677 1.0000 1.0000 2.18e-64 3qwg-a3-m2-cB_3qwg-a3-m1-cA
5 3r1f-a6-m1-cK 121 91 0.9570 0.7355 0.9780 1.91e-59 3r1f-a6-m1-cK_3r1f-a6-m1-cL
6 3r1f-a6-m1-cL 126 91 0.9570 0.7063 0.9780 1.93e-59 3r1f-a6-m1-cK_3r1f-a6-m1-cL
7 1u9y-a1-m1-cD 274 41 0.1828 0.0620 0.4146 0.92 1u9y-a1-m1-cA_1u9y-a1-m1-cD, 1u9y-a1-m1-cC_1u9y-a1-m1-cD
8 1u9y-a1-m1-cC 274 41 0.1828 0.0620 0.4146 0.92 1u9y-a1-m1-cC_1u9y-a1-m1-cD
9 1u9y-a1-m1-cA 274 41 0.1828 0.0620 0.4146 0.92 1u9y-a1-m1-cA_1u9y-a1-m1-cD
10 4zxp-a3-m1-cA 195 17 0.1183 0.0564 0.6471 4.7 4zxp-a3-m1-cA_4zxp-a3-m1-cB
11 7jz6-a1-m1-cD 662 70 0.1935 0.0272 0.2571 4.7 7jz6-a1-m1-cB_7jz6-a1-m1-cD, 7jz6-a1-m1-cC_7jz6-a1-m1-cD
12 7jz6-a1-m1-cC 662 70 0.1935 0.0272 0.2571 4.7 7jz6-a1-m1-cC_7jz6-a1-m1-cD
13 7jz6-a1-m1-cB 662 70 0.1935 0.0272 0.2571 4.7 7jz6-a1-m1-cB_7jz6-a1-m1-cD
14 4zxp-a3-m1-cB 196 17 0.1183 0.0561 0.6471 4.8 4zxp-a3-m1-cA_4zxp-a3-m1-cB

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Reference:
Jacob Schwartz et al.

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