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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=83)
TTGRLDLPPGFMFKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESD
WNQHKELEKCRGVFPENFTERVQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1bb9-a1-m2-cA 83 83 1.0000 1.0000 1.0000 7.08e-59 1bb9-a1-m1-cA_1bb9-a1-m2-cA
2 1bb9-a1-m1-cA 83 83 1.0000 1.0000 1.0000 7.08e-59 1bb9-a1-m1-cA_1bb9-a1-m2-cA
3 6a9c-a1-m1-cA 59 69 0.2530 0.3559 0.3043 3.33e-05 6a9c-a1-m1-cA_6a9c-a1-m1-cB
4 6a9c-a1-m1-cB 66 69 0.2530 0.3182 0.3043 4.20e-05 6a9c-a1-m1-cA_6a9c-a1-m1-cB
5 5k26-a1-m1-cB 75 65 0.2530 0.2800 0.3231 5.79e-04 5k26-a1-m1-cB_5k26-a1-m1-cA
6 5k26-a1-m1-cA 77 65 0.2530 0.2727 0.3231 5.94e-04 5k26-a1-m1-cB_5k26-a1-m1-cA
7 6aqb-a1-m2-cB 70 65 0.2530 0.3000 0.3231 6.66e-04 6aqb-a1-m1-cA_6aqb-a1-m2-cB
8 6aqb-a1-m1-cA 70 65 0.2530 0.3000 0.3231 6.66e-04 6aqb-a1-m1-cA_6aqb-a1-m2-cB
9 6cq7-a2-m2-cA 73 65 0.2530 0.2877 0.3231 8.02e-04 6cq7-a2-m1-cA_6cq7-a2-m2-cA
10 6cq7-a2-m1-cA 73 65 0.2530 0.2877 0.3231 8.02e-04 6cq7-a2-m1-cA_6cq7-a2-m2-cA
11 2sem-a1-m1-cB 59 65 0.2410 0.3390 0.3077 0.002 2sem-a1-m1-cA_2sem-a1-m1-cB
12 2sem-a1-m1-cA 58 65 0.2410 0.3448 0.3077 0.002 2sem-a1-m1-cA_2sem-a1-m1-cB
13 4iio-a1-m1-cA 63 76 0.2289 0.3016 0.2500 0.015 4iio-a1-m1-cB_4iio-a1-m1-cA
14 2d0n-a1-m1-cA 59 65 0.2410 0.3390 0.3077 0.027 2d0n-a1-m1-cC_2d0n-a1-m1-cA
15 2d0n-a1-m1-cC 56 65 0.2410 0.3571 0.3077 0.035 2d0n-a1-m1-cC_2d0n-a1-m1-cA
16 2esw-a3-m1-cA 60 75 0.2289 0.3167 0.2533 0.23 2esw-a3-m1-cB_2esw-a3-m1-cA
17 5sxp-a2-m1-cB 61 69 0.2289 0.3115 0.2754 0.25 5sxp-a2-m1-cD_5sxp-a2-m1-cB
18 5sxp-a2-m1-cD 60 69 0.2289 0.3167 0.2754 0.27 5sxp-a2-m1-cD_5sxp-a2-m1-cB
19 7dpa-a1-m1-cD 1642 62 0.2169 0.0110 0.2903 0.61 7dpa-a1-m1-cA_7dpa-a1-m1-cD
20 7dpa-a1-m1-cA 1642 62 0.2169 0.0110 0.2903 0.61 7dpa-a1-m1-cA_7dpa-a1-m1-cD
21 3nmz-a1-m1-cD 84 40 0.1687 0.1667 0.3500 0.80 3nmz-a1-m1-cD_3nmz-a1-m1-cC
22 3nmz-a1-m1-cC 85 40 0.1687 0.1647 0.3500 0.81 3nmz-a1-m1-cD_3nmz-a1-m1-cC
23 1ov3-a2-m2-cB 127 65 0.2289 0.1496 0.2923 0.91 1ov3-a2-m2-cB_1ov3-a2-m2-cA
24 2ak5-a1-m2-cA 60 69 0.2048 0.2833 0.2464 1.0 2ak5-a1-m2-cA_2ak5-a1-m2-cB
25 2ak5-a1-m2-cB 64 69 0.2048 0.2656 0.2464 1.1 2ak5-a1-m2-cA_2ak5-a1-m2-cB
26 1ov3-a2-m2-cA 134 65 0.2289 0.1418 0.2923 1.1 1ov3-a2-m1-cA_1ov3-a2-m2-cA, 1ov3-a2-m2-cB_1ov3-a2-m2-cA
27 1ov3-a2-m1-cA 134 65 0.2289 0.1418 0.2923 1.1 1ov3-a2-m1-cA_1ov3-a2-m2-cA
28 1z9z-a5-m5-cB 60 24 0.1205 0.1667 0.4167 1.5 1z9z-a5-m1-cB_1z9z-a5-m5-cB
29 1z9z-a5-m1-cB 60 24 0.1205 0.1667 0.4167 1.5 1z9z-a5-m1-cB_1z9z-a5-m5-cB
30 1z9z-a4-m4-cB 60 24 0.1205 0.1667 0.4167 1.5 1z9z-a4-m1-cA_1z9z-a4-m4-cB
31 1z9z-a4-m1-cA 60 24 0.1205 0.1667 0.4167 1.5 1z9z-a4-m1-cA_1z9z-a4-m4-cB
32 2p4r-a2-m2-cA 55 68 0.2048 0.3091 0.2500 1.5 2p4r-a2-m1-cA_2p4r-a2-m2-cA
33 2p4r-a2-m1-cA 55 68 0.2048 0.3091 0.2500 1.5 2p4r-a2-m1-cA_2p4r-a2-m2-cA
34 2esw-a3-m1-cB 57 68 0.2048 0.2982 0.2500 1.7 2esw-a3-m1-cB_2esw-a3-m1-cA
35 1bu1-a1-m1-cC 56 68 0.2530 0.3750 0.3088 1.9 1bu1-a1-m1-cC_1bu1-a1-m1-cE
36 1bu1-a1-m1-cE 57 68 0.2530 0.3684 0.3088 2.6 1bu1-a1-m1-cC_1bu1-a1-m1-cE
37 4u5w-a1-m1-cD 160 68 0.2530 0.1313 0.3088 2.7 4u5w-a1-m1-cD_4u5w-a1-m1-cB
38 4u5w-a1-m1-cB 163 68 0.2530 0.1288 0.3088 3.2 4u5w-a1-m1-cD_4u5w-a1-m1-cB
39 6gbu-a1-m1-cG 54 66 0.2410 0.3704 0.3030 5.2 6gbu-a1-m1-cE_6gbu-a1-m1-cG
40 2hck-a1-m1-cB 437 68 0.2530 0.0481 0.3088 5.3 2hck-a1-m1-cA_2hck-a1-m1-cB
41 2hck-a1-m1-cA 437 68 0.2530 0.0481 0.3088 5.3 2hck-a1-m1-cA_2hck-a1-m1-cB
42 4f0l-a1-m1-cA 448 69 0.2169 0.0402 0.2609 8.5 4f0l-a1-m1-cA_4f0l-a1-m1-cB
43 4f0l-a1-m1-cB 449 69 0.2169 0.0401 0.2609 8.6 4f0l-a1-m1-cA_4f0l-a1-m1-cB
44 1wyx-a1-m1-cA 68 39 0.1566 0.1912 0.3333 9.5 1wyx-a1-m1-cA_1wyx-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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