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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=62)
TTNADRRKAATMRERRRLSKVNEAFETLKRSTSSNPNQRLPKVEILRNAIRYIEGLQALL
RD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1mdy-a2-m1-cD 62 62 1.0000 1.0000 1.0000 3.76e-39 1mdy-a2-m1-cC_1mdy-a2-m1-cD
2 1mdy-a2-m1-cC 62 62 1.0000 1.0000 1.0000 3.76e-39 1mdy-a2-m1-cC_1mdy-a2-m1-cD
3 7z5k-a1-m1-cB 56 55 0.7742 0.8571 0.8727 1.82e-29 7z5k-a1-m1-cA_7z5k-a1-m1-cB
4 7z5k-a1-m1-cA 56 53 0.7581 0.8393 0.8868 5.52e-29 7z5k-a1-m1-cA_7z5k-a1-m1-cB
5 2ql2-a3-m1-cB 59 59 0.3548 0.3729 0.3729 1.33e-04 2ql2-a3-m1-cD_2ql2-a3-m1-cB
6 2ql2-a3-m1-cD 57 57 0.3548 0.3860 0.3860 1.39e-04 2ql2-a3-m1-cD_2ql2-a3-m1-cB
7 1r05-a1-m1-cB 87 51 0.2419 0.1724 0.2941 0.014 1r05-a1-m1-cA_1r05-a1-m1-cB
8 1r05-a1-m1-cA 87 51 0.2419 0.1724 0.2941 0.014 1r05-a1-m1-cA_1r05-a1-m1-cB
9 5eyo-a2-m2-cC 88 53 0.2419 0.1705 0.2830 0.020 5eyo-a2-m1-cC_5eyo-a2-m2-cC
10 5eyo-a2-m1-cC 88 53 0.2419 0.1705 0.2830 0.020 5eyo-a2-m1-cC_5eyo-a2-m2-cC
11 6u2u-a1-m1-cB 44 41 0.2581 0.3636 0.3902 0.044 6u2u-a1-m1-cB_6u2u-a1-m1-cA
12 6u2u-a1-m1-cA 46 41 0.2581 0.3478 0.3902 0.055 6u2u-a1-m1-cB_6u2u-a1-m1-cA
13 6od5-a1-m1-cB 60 59 0.3387 0.3500 0.3559 0.075 6od5-a1-m1-cB_6od5-a1-m1-cA
14 6od5-a1-m1-cA 62 59 0.3387 0.3387 0.3559 0.084 6od5-a1-m1-cB_6od5-a1-m1-cA
15 6od3-a4-m1-cI 59 58 0.3226 0.3390 0.3448 0.35 6od3-a4-m1-cJ_6od3-a4-m1-cI
16 2mh3-a1-m1-cB 70 63 0.2581 0.2286 0.2540 0.49 2mh3-a1-m1-cA_2mh3-a1-m1-cB
17 2mh3-a1-m1-cA 70 63 0.2581 0.2286 0.2540 0.49 2mh3-a1-m1-cA_2mh3-a1-m1-cB
18 3u5v-a1-m2-cA 62 51 0.2742 0.2742 0.3333 0.67 3u5v-a1-m1-cA_3u5v-a1-m2-cA
19 3u5v-a1-m1-cA 62 51 0.2742 0.2742 0.3333 0.67 3u5v-a1-m1-cA_3u5v-a1-m2-cA
20 6od3-a4-m1-cJ 52 51 0.2742 0.3269 0.3333 3.3 6od3-a4-m1-cJ_6od3-a4-m1-cI
21 2bff-a1-m2-cA 392 35 0.2258 0.0357 0.4000 5.0 2bff-a1-m1-cA_2bff-a1-m2-cA
22 2bff-a1-m1-cA 392 35 0.2258 0.0357 0.4000 5.0 2bff-a1-m1-cA_2bff-a1-m2-cA
23 3tgw-a1-m1-cB 441 31 0.1613 0.0227 0.3226 5.9 3tgw-a1-m1-cB_3tgw-a1-m1-cA
24 3tgw-a1-m1-cA 445 31 0.1613 0.0225 0.3226 6.1 3tgw-a1-m1-cB_3tgw-a1-m1-cA
25 1am9-a1-m1-cD 76 54 0.2903 0.2368 0.3333 7.8 1am9-a1-m1-cD_1am9-a1-m1-cC
26 1am9-a1-m1-cC 82 54 0.2903 0.2195 0.3333 8.6 1am9-a1-m1-cD_1am9-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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