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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
TTPERRVKEILDEMDIVYFTHHVVEGWNVAFYLGKKLAIEVNGVYWASKQKNVNKDKRKL
SELHSKGYRVLTIEDDELNDIDKVKQQIQKFWVTHIS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3r3p-a2-m2-cB 98 97 1.0000 0.9898 1.0000 3.98e-68 3r3p-a2-m1-cB_3r3p-a2-m2-cB, 3r3p-a2-m2-cA_3r3p-a2-m2-cB
2 3r3p-a2-m1-cB 98 97 1.0000 0.9898 1.0000 3.98e-68 3r3p-a2-m1-cB_3r3p-a2-m2-cB
3 3r3p-a2-m2-cA 97 97 1.0000 1.0000 1.0000 5.02e-68 3r3p-a2-m2-cA_3r3p-a2-m2-cB
4 5v4d-a2-m1-cF 126 70 0.2165 0.1667 0.3000 2.6 5v4d-a2-m1-cF_5v4d-a2-m1-cE
5 5v4d-a2-m1-cE 127 70 0.2165 0.1654 0.3000 3.0 5v4d-a2-m1-cF_5v4d-a2-m1-cE
6 1div-a1-m2-cA 149 73 0.1856 0.1208 0.2466 4.1 1div-a1-m1-cA_1div-a1-m2-cA
7 1div-a1-m1-cA 149 73 0.1856 0.1208 0.2466 4.1 1div-a1-m1-cA_1div-a1-m2-cA
8 1eqr-a1-m1-cC 590 40 0.1237 0.0203 0.3000 9.5 1eqr-a1-m1-cA_1eqr-a1-m1-cC, 1eqr-a1-m1-cB_1eqr-a1-m1-cC
9 1eqr-a1-m1-cB 590 40 0.1237 0.0203 0.3000 9.5 1eqr-a1-m1-cA_1eqr-a1-m1-cB, 1eqr-a1-m1-cB_1eqr-a1-m1-cC
10 1eqr-a1-m1-cA 590 40 0.1237 0.0203 0.3000 9.5 1eqr-a1-m1-cA_1eqr-a1-m1-cB, 1eqr-a1-m1-cA_1eqr-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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