Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
TTPIVHLKGDANTLKCLRYRFKKHCTLYTAVSSTWHWTKSAIVTLTYDSEWQRDQFLSQV
KIPKTITVSTGFMS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2q79-a1-m2-cA 74 74 1.0000 1.0000 1.0000 5.58e-51 2q79-a1-m1-cA_2q79-a1-m2-cA
2 2q79-a1-m1-cA 74 74 1.0000 1.0000 1.0000 5.58e-51 2q79-a1-m1-cA_2q79-a1-m2-cA
3 1a7g-a1-m2-cE 82 80 0.7027 0.6341 0.6500 1.00e-30 1a7g-a1-m1-cE_1a7g-a1-m2-cE
4 1a7g-a1-m1-cE 82 80 0.7027 0.6341 0.6500 1.00e-30 1a7g-a1-m1-cE_1a7g-a1-m2-cE
5 1f9f-a2-m1-cD 82 78 0.5676 0.5122 0.5385 1.68e-26 1f9f-a2-m1-cC_1f9f-a2-m1-cD
6 1f9f-a2-m1-cC 76 73 0.5541 0.5395 0.5616 2.72e-26 1f9f-a2-m1-cC_1f9f-a2-m1-cD
7 1r8h-a7-m1-cC 83 77 0.6081 0.5422 0.5844 2.39e-24 1r8h-a7-m1-cC_1r8h-a7-m1-cD
8 1r8h-a7-m1-cD 87 81 0.6081 0.5172 0.5556 1.03e-23 1r8h-a7-m1-cC_1r8h-a7-m1-cD
9 1r8h-a4-m1-cE 87 81 0.6081 0.5172 0.5556 1.03e-23 1r8h-a4-m1-cB_1r8h-a4-m1-cE
10 1r8h-a4-m1-cB 87 81 0.6081 0.5172 0.5556 1.03e-23 1r8h-a4-m1-cB_1r8h-a4-m1-cE
11 1jjh-a2-m3-cB 78 67 0.3378 0.3205 0.3731 1.53e-08 1jjh-a2-m1-cB_1jjh-a2-m3-cB
12 1jjh-a2-m1-cB 78 67 0.3378 0.3205 0.3731 1.53e-08 1jjh-a2-m1-cB_1jjh-a2-m3-cB
13 1jjh-a1-m2-cA 77 67 0.3514 0.3377 0.3881 5.70e-08 1jjh-a1-m1-cA_1jjh-a1-m2-cA
14 1jjh-a1-m1-cA 77 67 0.3514 0.3377 0.3881 5.70e-08 1jjh-a1-m1-cA_1jjh-a1-m2-cA
15 1jjh-a3-m3-cC 73 67 0.3378 0.3425 0.3731 7.90e-07 1jjh-a3-m1-cC_1jjh-a3-m3-cC
16 1jjh-a3-m1-cC 73 67 0.3378 0.3425 0.3731 7.90e-07 1jjh-a3-m1-cC_1jjh-a3-m3-cC
17 6bus-a1-m1-c2 92 75 0.3378 0.2717 0.3333 6.97e-06 6bus-a1-m1-c1_6bus-a1-m1-c2
18 6bus-a1-m1-c1 92 75 0.3378 0.2717 0.3333 6.97e-06 6bus-a1-m1-c1_6bus-a1-m1-c2
19 4xdy-a1-m1-cB 331 30 0.1486 0.0332 0.3667 0.48 4xdy-a1-m1-cA_4xdy-a1-m1-cB
20 4xdy-a1-m1-cA 331 30 0.1486 0.0332 0.3667 0.48 4xdy-a1-m1-cA_4xdy-a1-m1-cB
21 8dgc-a1-m1-cD 2004 49 0.1757 0.0065 0.2653 3.9 8dgc-a1-m1-cD_8dgc-a1-m1-cC
22 8dgc-a1-m1-cC 2028 49 0.1757 0.0064 0.2653 4.0 8dgc-a1-m1-cA_8dgc-a1-m1-cC, 8dgc-a1-m1-cD_8dgc-a1-m1-cC
23 8dgc-a1-m1-cA 2028 49 0.1757 0.0064 0.2653 4.0 8dgc-a1-m1-cA_8dgc-a1-m1-cC
24 4amt-a1-m2-cA 349 22 0.1622 0.0344 0.5455 7.1 4amt-a1-m1-cA_4amt-a1-m2-cA
25 4amt-a1-m1-cA 349 22 0.1622 0.0344 0.5455 7.1 4amt-a1-m1-cA_4amt-a1-m2-cA
26 3k9u-a1-m1-cB 159 44 0.1757 0.0818 0.2955 7.7 3k9u-a1-m1-cA_3k9u-a1-m1-cB
27 3k9u-a1-m1-cA 159 44 0.1757 0.0818 0.2955 7.7 3k9u-a1-m1-cA_3k9u-a1-m1-cB
28 3fix-a6-m1-cD 155 44 0.1757 0.0839 0.2955 7.9 3fix-a6-m1-cD_3fix-a6-m1-cC
29 3fix-a6-m1-cC 162 44 0.1757 0.0802 0.2955 8.3 3fix-a6-m1-cD_3fix-a6-m1-cC
30 8bgl-a1-m1-cB 215 36 0.1622 0.0558 0.3333 8.9 8bgl-a1-m1-cA_8bgl-a1-m1-cB
31 8bgl-a1-m1-cA 215 36 0.1622 0.0558 0.3333 8.9 8bgl-a1-m1-cA_8bgl-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600