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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=81)
TTPTQEGQTLRDSVEKALHNYFAHLEGQPVTDVYNMVLCEVEAPLLETVMNHVKGNQTKA
SELLGLNRGTLRKKLKQYDLL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6m10-a3-m3-cD 81 81 1.0000 1.0000 1.0000 4.18e-56 6m10-a3-m1-cD_6m10-a3-m3-cD
2 6m10-a3-m1-cD 81 81 1.0000 1.0000 1.0000 4.18e-56 6m10-a3-m1-cD_6m10-a3-m3-cD
3 4ihw-a1-m1-cA 91 71 0.5432 0.4835 0.6197 4.96e-29 4ihw-a1-m1-cA_4ihw-a1-m1-cB
4 4ihw-a1-m1-cB 98 71 0.5432 0.4490 0.6197 5.91e-29 4ihw-a1-m1-cA_4ihw-a1-m1-cB
5 1ety-a1-m1-cA 74 71 0.5185 0.5676 0.5915 3.89e-25 1ety-a1-m1-cA_1ety-a1-m1-cB
6 1ety-a1-m1-cB 78 71 0.5185 0.5385 0.5915 5.83e-25 1ety-a1-m1-cA_1ety-a1-m1-cB
7 1ntc-a1-m1-cB 91 41 0.1975 0.1758 0.3902 0.005 1ntc-a1-m1-cA_1ntc-a1-m1-cB
8 1ntc-a1-m1-cA 91 41 0.1975 0.1758 0.3902 0.005 1ntc-a1-m1-cA_1ntc-a1-m1-cB
9 4l5e-a1-m2-cA 46 32 0.1728 0.3043 0.4375 0.21 4l5e-a1-m1-cA_4l5e-a1-m2-cA
10 4l5e-a1-m1-cA 46 32 0.1728 0.3043 0.4375 0.21 4l5e-a1-m1-cA_4l5e-a1-m2-cA
11 6zdw-a1-m1-cAAA 142 19 0.1111 0.0634 0.4737 4.9 6zdw-a1-m1-cAAA_6zdw-a1-m1-cBBB
12 3m5p-a1-m2-cA 532 33 0.1235 0.0188 0.3030 7.5 3m5p-a1-m1-cA_3m5p-a1-m2-cA
13 3m5p-a1-m1-cA 532 33 0.1235 0.0188 0.3030 7.5 3m5p-a1-m1-cA_3m5p-a1-m2-cA
14 5i6j-a1-m2-cA 410 28 0.1235 0.0244 0.3571 7.6 5i6j-a1-m1-cA_5i6j-a1-m2-cA
15 5i6j-a1-m1-cA 410 28 0.1235 0.0244 0.3571 7.6 5i6j-a1-m1-cA_5i6j-a1-m2-cA
16 3vcb-a1-m1-cB 89 40 0.1605 0.1461 0.3250 7.8 3vcb-a1-m1-cA_3vcb-a1-m1-cB
17 3vcb-a1-m1-cA 89 40 0.1605 0.1461 0.3250 7.8 3vcb-a1-m1-cA_3vcb-a1-m1-cB
18 3vc8-a1-m1-cA 81 40 0.1605 0.1605 0.3250 9.1 3vc8-a1-m1-cA_3vc8-a1-m1-cB
19 3vc8-a1-m1-cB 85 40 0.1605 0.1529 0.3250 9.1 3vc8-a1-m1-cA_3vc8-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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