Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
TTSQKHRDFVAEPMGEKPVGSLAGIGEVLGKKLEERGFDKAYVVLGQFLVLKKDEDLFRE
WLKDTCGANAKQSRDCFGCLREWCDAFL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6usi-a1-m1-cA 89 88 1.0000 0.9888 1.0000 2.41e-61 6usi-a1-m1-cB_6usi-a1-m1-cA
2 6usi-a1-m1-cB 88 88 1.0000 1.0000 1.0000 2.95e-61 6usi-a1-m1-cB_6usi-a1-m1-cA
3 5z8t-a2-m1-cC 395 32 0.1705 0.0380 0.4688 0.28 5z8t-a2-m1-cB_5z8t-a2-m1-cC
4 5z8t-a2-m1-cB 395 32 0.1705 0.0380 0.4688 0.28 5z8t-a2-m1-cB_5z8t-a2-m1-cC
5 3tsn-a2-m1-cD 358 31 0.1591 0.0391 0.4516 0.39 3tsn-a2-m1-cC_3tsn-a2-m1-cD
6 3tsn-a2-m1-cC 358 31 0.1591 0.0391 0.4516 0.39 3tsn-a2-m1-cC_3tsn-a2-m1-cD
7 5iwd-a1-m2-cA 261 46 0.1250 0.0421 0.2391 1.5 5iwd-a1-m1-cA_5iwd-a1-m2-cA
8 5iwd-a1-m1-cA 261 46 0.1250 0.0421 0.2391 1.5 5iwd-a1-m1-cA_5iwd-a1-m2-cA
9 1obb-a1-m1-cA 477 29 0.1477 0.0273 0.4483 2.4 1obb-a1-m1-cB_1obb-a1-m1-cA
10 1obb-a1-m1-cB 475 29 0.1477 0.0274 0.4483 2.4 1obb-a1-m1-cB_1obb-a1-m1-cA
11 8cte-a1-m1-cL 388 26 0.1250 0.0284 0.4231 6.8 8cte-a1-m1-cL_8cte-a1-m1-cQ
12 8cte-a1-m1-cQ 390 26 0.1250 0.0282 0.4231 6.8 8cte-a1-m1-cL_8cte-a1-m1-cQ
13 2qsx-a1-m1-cB 183 23 0.1136 0.0546 0.4348 7.2 2qsx-a1-m1-cA_2qsx-a1-m1-cB
14 2qsx-a1-m1-cA 178 23 0.1136 0.0562 0.4348 7.7 2qsx-a1-m1-cA_2qsx-a1-m1-cB
15 6k9l-a1-m1-cB 2551 45 0.1477 0.0051 0.2889 8.3 6k9l-a1-m1-cB_6k9l-a1-m1-cA
16 6k9l-a1-m1-cA 2552 45 0.1477 0.0051 0.2889 8.3 6k9l-a1-m1-cB_6k9l-a1-m1-cA
17 7ni6-a1-m1-cB 1423 45 0.1477 0.0091 0.2889 9.1 7ni6-a1-m1-cB_7ni6-a1-m1-cA
18 7ni6-a1-m1-cA 1424 45 0.1477 0.0091 0.2889 9.2 7ni6-a1-m1-cB_7ni6-a1-m1-cA
19 2gwh-a1-m1-cA 285 52 0.1932 0.0596 0.3269 9.7 2gwh-a1-m1-cA_2gwh-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600