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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
TTTFMDNVLGWLHKGYPEGVPPKDYFALLALLKRSLTEDEVVRAAQAILRSTDGQSPVTD
DDIRNAVHQIIEKEPTAEEINQVAARLASVGWPLAVPV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3ol3-a1-m1-cA 98 98 1.0000 1.0000 1.0000 4.18e-69 3ol3-a1-m1-cB_3ol3-a1-m1-cA
2 3ol3-a1-m1-cB 92 92 0.9388 1.0000 1.0000 8.54e-65 3ol3-a1-m1-cB_3ol3-a1-m1-cA
3 4wpx-a1-m1-cA 171 48 0.1531 0.0877 0.3125 1.9 4wpx-a1-m1-cA_4wpx-a1-m1-cD
4 4wpx-a1-m1-cD 172 48 0.1531 0.0872 0.3125 2.1 4wpx-a1-m1-cA_4wpx-a1-m1-cD
5 7jwk-a2-m1-cD 328 23 0.0918 0.0274 0.3913 2.2 7jwk-a2-m1-cD_7jwk-a2-m1-cC
6 7jwk-a2-m1-cC 333 23 0.0918 0.0270 0.3913 2.2 7jwk-a2-m1-cD_7jwk-a2-m1-cC
7 2ku1-a1-m1-cE 237 40 0.1531 0.0633 0.3750 3.3 2ku1-a1-m1-cC_2ku1-a1-m1-cE
8 2ku1-a1-m1-cC 237 40 0.1531 0.0633 0.3750 3.3 2ku1-a1-m1-cC_2ku1-a1-m1-cE
9 1yar-a1-m2-cE 221 40 0.1531 0.0679 0.3750 3.3 1yar-a1-m2-cD_1yar-a1-m2-cE
10 1yar-a1-m2-cD 221 40 0.1531 0.0679 0.3750 3.3 1yar-a1-m2-cD_1yar-a1-m2-cE
11 1elu-a1-m1-cB 381 31 0.1429 0.0367 0.4516 4.7 1elu-a1-m1-cA_1elu-a1-m1-cB
12 1elu-a1-m1-cA 381 31 0.1429 0.0367 0.4516 4.7 1elu-a1-m1-cA_1elu-a1-m1-cB
13 3a1k-a2-m2-cA 508 38 0.1429 0.0276 0.3684 4.8 3a1k-a2-m1-cA_3a1k-a2-m2-cA
14 3a1k-a2-m1-cA 508 38 0.1429 0.0276 0.3684 4.8 3a1k-a2-m1-cA_3a1k-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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