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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
TTVLWGCELSQERRTWTFRPSCRLLLHTICLGEKAKEEMHRVEILPPQPVTIASLQASVL
PMVSMVGVQLSPPVTFQLRAGSGPVFLSGQERY

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3t30-a2-m1-cH 93 93 1.0000 1.0000 1.0000 2.59e-64 3t30-a2-m1-cI_3t30-a2-m1-cH
2 3t30-a2-m1-cI 92 93 0.9892 1.0000 0.9892 1.55e-61 3t30-a2-m1-cI_3t30-a2-m1-cH
3 1k5j-a1-m1-cD 90 89 0.5054 0.5222 0.5281 1.06e-32 1k5j-a1-m1-cC_1k5j-a1-m1-cD
4 1k5j-a1-m1-cC 89 90 0.5054 0.5281 0.5222 4.94e-31 1k5j-a1-m1-cC_1k5j-a1-m1-cD
5 1xe0-a2-m1-cJ 104 98 0.4086 0.3654 0.3878 3.85e-19 1xe0-a2-m1-cJ_1xe0-a2-m1-cI
6 1xe0-a2-m1-cI 105 99 0.4086 0.3619 0.3838 4.46e-19 1xe0-a2-m1-cJ_1xe0-a2-m1-cI
7 8as5-a1-m1-cE 97 94 0.3871 0.3711 0.3830 1.74e-12 8as5-a1-m1-cA_8as5-a1-m1-cE
8 8as5-a1-m1-cA 87 88 0.3548 0.3793 0.3750 3.99e-10 8as5-a1-m1-cA_8as5-a1-m1-cE
9 1nlq-a1-m1-cC 96 96 0.3441 0.3333 0.3333 4.17e-07 1nlq-a1-m1-cC_1nlq-a1-m1-cE
10 1nlq-a1-m1-cE 98 98 0.3548 0.3367 0.3367 1.07e-06 1nlq-a1-m1-cC_1nlq-a1-m1-cE
11 7rwk-a1-m1-cB 368 45 0.1613 0.0408 0.3333 5.6 7rwk-a1-m1-cA_7rwk-a1-m1-cB
12 7rwk-a1-m1-cA 368 45 0.1613 0.0408 0.3333 5.6 7rwk-a1-m1-cA_7rwk-a1-m1-cB
13 5ykr-a1-m1-cB 452 22 0.0860 0.0177 0.3636 8.2 5ykr-a1-m1-cA_5ykr-a1-m1-cB
14 5ykr-a1-m1-cA 452 22 0.0860 0.0177 0.3636 8.2 5ykr-a1-m1-cA_5ykr-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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