Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=73)
TVQARQLLSGIVQQQNDLLRAIEAQQHLLQLTVWGIKQLMEWDREINNYTSLIHSLIEES
QNQQEKNEQELLE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3cp1-a1-m3-cA 73 73 1.0000 1.0000 1.0000 8.05e-46 3cp1-a1-m2-cA_3cp1-a1-m3-cA
2 3cp1-a1-m2-cA 73 73 1.0000 1.0000 1.0000 8.05e-46 3cp1-a1-m2-cA_3cp1-a1-m3-cA
3 7ska-a1-m1-cZ 142 125 0.9589 0.4930 0.5600 3.65e-34 7ska-a1-m1-cO_7ska-a1-m1-cZ
4 7ska-a1-m1-cO 142 125 0.9589 0.4930 0.5600 3.65e-34 7ska-a1-m1-cO_7ska-a1-m1-cZ
5 3k9a-a1-m3-cA 82 67 0.7397 0.6585 0.8060 1.90e-29 3k9a-a1-m2-cA_3k9a-a1-m3-cA
6 3k9a-a1-m2-cA 82 67 0.7397 0.6585 0.8060 1.90e-29 3k9a-a1-m2-cA_3k9a-a1-m3-cA
7 3wfv-a1-m3-cA 86 75 0.6849 0.5814 0.6667 3.55e-28 3wfv-a1-m2-cA_3wfv-a1-m3-cA
8 3wfv-a1-m2-cA 86 75 0.6849 0.5814 0.6667 3.55e-28 3wfv-a1-m2-cA_3wfv-a1-m3-cA
9 7n6w-a1-m1-cA 591 125 0.8767 0.1083 0.5120 6.45e-27 7n6w-a1-m1-cC_7n6w-a1-m1-cA
10 7n6w-a1-m1-cC 585 124 0.8630 0.1077 0.5081 2.46e-26 7n6w-a1-m1-cC_7n6w-a1-m1-cA
11 5fyj-a1-m3-cB 154 124 0.7945 0.3766 0.4677 1.43e-24 5fyj-a1-m2-cB_5fyj-a1-m3-cB
12 5fyj-a1-m2-cB 154 124 0.7945 0.3766 0.4677 1.43e-24 5fyj-a1-m2-cB_5fyj-a1-m3-cB
13 6nij-a1-m1-cB 140 125 0.8082 0.4214 0.4720 2.48e-23 6nij-a1-m1-cF_6nij-a1-m1-cB
14 6nij-a1-m1-cF 139 125 0.7945 0.4173 0.4640 2.11e-22 6nij-a1-m1-cF_6nij-a1-m1-cB
15 7ucg-a1-m1-cM 134 124 0.6986 0.3806 0.4113 6.54e-18 7ucg-a1-m1-cB_7ucg-a1-m1-cM
16 7ucg-a1-m1-cB 134 124 0.6986 0.3806 0.4113 6.54e-18 7ucg-a1-m1-cB_7ucg-a1-m1-cM
17 2kp8-a1-m1-cC 72 36 0.4521 0.4583 0.9167 7.76e-16 2kp8-a1-m1-cB_2kp8-a1-m1-cC
18 2kp8-a1-m1-cC 72 24 0.3288 0.3333 1.0000 2.56e-08 2kp8-a1-m1-cB_2kp8-a1-m1-cC
19 2kp8-a1-m1-cB 72 36 0.4521 0.4583 0.9167 7.76e-16 2kp8-a1-m1-cB_2kp8-a1-m1-cC
20 2kp8-a1-m1-cB 72 24 0.3288 0.3333 1.0000 2.56e-08 2kp8-a1-m1-cB_2kp8-a1-m1-cC
21 6vo3-a1-m1-cF 124 107 0.6164 0.3629 0.4206 1.46e-15 6vo3-a1-m1-cE_6vo3-a1-m1-cF
22 6vo3-a1-m1-cE 124 107 0.6164 0.3629 0.4206 1.46e-15 6vo3-a1-m1-cE_6vo3-a1-m1-cF
23 6ccb-a2-m5-cB 131 124 0.6575 0.3664 0.3871 2.17e-15 6ccb-a2-m3-cB_6ccb-a2-m5-cB
24 6ccb-a2-m3-cB 131 124 0.6575 0.3664 0.3871 2.17e-15 6ccb-a2-m3-cB_6ccb-a2-m5-cB
25 4kht-a2-m3-cA 66 32 0.4247 0.4697 0.9688 3.94e-15 4kht-a2-m2-cA_4kht-a2-m3-cA
26 4kht-a2-m2-cA 66 32 0.4247 0.4697 0.9688 3.94e-15 4kht-a2-m2-cA_4kht-a2-m3-cA
27 7mxd-a1-m1-cI 136 124 0.6575 0.3529 0.3871 5.17e-15 7mxd-a1-m1-cB_7mxd-a1-m1-cI
28 7mxd-a1-m1-cB 136 124 0.6575 0.3529 0.3871 5.17e-15 7mxd-a1-m1-cB_7mxd-a1-m1-cI
29 3vgy-a1-m3-cC 49 32 0.4110 0.6122 0.9375 1.80e-14 3vgy-a1-m1-cC_3vgy-a1-m3-cC
30 3vgy-a1-m1-cC 49 32 0.4110 0.6122 0.9375 1.80e-14 3vgy-a1-m1-cC_3vgy-a1-m3-cC
31 7rso-a1-m1-cF 124 105 0.6575 0.3871 0.4571 4.07e-14 7rso-a1-m1-cE_7rso-a1-m1-cF
32 7rso-a1-m1-cE 124 105 0.6575 0.3871 0.4571 4.07e-14 7rso-a1-m1-cE_7rso-a1-m1-cF
33 5cn0-a1-m3-cA 70 70 0.5068 0.5286 0.5286 8.16e-14 5cn0-a1-m2-cA_5cn0-a1-m3-cA
34 5cn0-a1-m2-cA 70 70 0.5068 0.5286 0.5286 8.16e-14 5cn0-a1-m2-cA_5cn0-a1-m3-cA
35 6p65-a1-m1-cE 557 105 0.5753 0.0754 0.4000 1.26e-13 6p65-a1-m1-cE_6p65-a1-m1-cB
36 6p65-a1-m1-cB 557 105 0.5753 0.0754 0.4000 1.26e-13 6p65-a1-m1-cE_6p65-a1-m1-cB
37 6dcq-a1-m1-cF 139 124 0.6301 0.3309 0.3710 1.42e-13 6dcq-a1-m1-cB_6dcq-a1-m1-cF
38 6mzj-a1-m1-cE 550 104 0.5616 0.0745 0.3942 9.12e-13 6mzj-a1-m1-cB_6mzj-a1-m1-cE
39 6mzj-a1-m1-cB 550 104 0.5616 0.0745 0.3942 9.12e-13 6mzj-a1-m1-cB_6mzj-a1-m1-cE
40 6ohy-a1-m1-cF 120 41 0.3288 0.2000 0.5854 1.64e-11 6ohy-a1-m1-cF_6ohy-a1-m1-cE
41 6ohy-a1-m1-cE 120 41 0.3288 0.2000 0.5854 1.64e-11 6ohy-a1-m1-cF_6ohy-a1-m1-cE
42 3p7k-a2-m3-cA 45 32 0.3425 0.5556 0.7812 6.45e-11 3p7k-a2-m2-cA_3p7k-a2-m3-cA
43 3p7k-a2-m2-cA 45 32 0.3425 0.5556 0.7812 6.45e-11 3p7k-a2-m2-cA_3p7k-a2-m3-cA
44 7ur6-a1-m1-cI 132 103 0.5890 0.3258 0.4175 2.63e-10 7ur6-a1-m1-cC_7ur6-a1-m1-cI
45 7ur6-a1-m1-cC 132 103 0.5890 0.3258 0.4175 2.63e-10 7ur6-a1-m1-cC_7ur6-a1-m1-cI
46 6wix-a1-m3-cB 120 101 0.5068 0.3083 0.3663 5.28e-10 6wix-a1-m2-cB_6wix-a1-m3-cB
47 6wix-a1-m2-cB 120 101 0.5068 0.3083 0.3663 5.28e-10 6wix-a1-m2-cB_6wix-a1-m3-cB
48 6dcq-a1-m1-cB 122 95 0.4658 0.2787 0.3579 2.37e-09 6dcq-a1-m1-cB_6dcq-a1-m1-cF
49 1jq0-a1-m3-cA 71 69 0.4932 0.5070 0.5217 2.80e-09 1jq0-a1-m2-cA_1jq0-a1-m3-cA
50 1jq0-a1-m2-cA 71 69 0.4932 0.5070 0.5217 2.80e-09 1jq0-a1-m2-cA_1jq0-a1-m3-cA
51 2zfc-a1-m1-cC 44 32 0.2877 0.4773 0.6562 3.07e-09 2zfc-a1-m1-cA_2zfc-a1-m1-cC
52 2zfc-a1-m1-cA 44 32 0.2877 0.4773 0.6562 3.07e-09 2zfc-a1-m1-cA_2zfc-a1-m1-cC
53 1jpx-a1-m3-cA 59 58 0.4384 0.5424 0.5517 5.28e-09 1jpx-a1-m2-cA_1jpx-a1-m3-cA
54 1jpx-a1-m2-cA 59 58 0.4384 0.5424 0.5517 5.28e-09 1jpx-a1-m2-cA_1jpx-a1-m3-cA
55 6nqd-a1-m1-cF 124 102 0.5205 0.3065 0.3725 1.53e-08 6nqd-a1-m1-cB_6nqd-a1-m1-cF
56 6nqd-a1-m1-cB 124 102 0.5205 0.3065 0.3725 1.53e-08 6nqd-a1-m1-cB_6nqd-a1-m1-cF
57 8dua-a1-m1-cF 91 38 0.2192 0.1758 0.4211 0.28 8dua-a1-m1-cB_8dua-a1-m1-cF
58 8dua-a1-m1-cB 91 38 0.2192 0.1758 0.4211 0.28 8dua-a1-m1-cB_8dua-a1-m1-cF
59 5tgt-a1-m1-cB 453 36 0.1507 0.0243 0.3056 8.9 5tgt-a1-m1-cB_5tgt-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600