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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
TVTLNEKYNFLGISIVGQSNGGIYIGSIKGGAVAADGRIEPGDLLQVNDINFENSNDDAV
RVLRDIVHKPGPIVLTVAKC

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3fy5-a2-m2-cB 80 80 1.0000 1.0000 1.0000 1.73e-53 3fy5-a2-m1-cB_3fy5-a2-m2-cB
2 3fy5-a2-m1-cB 80 80 1.0000 1.0000 1.0000 1.73e-53 3fy5-a2-m1-cB_3fy5-a2-m2-cB
3 2f0a-a5-m1-cA 87 84 0.9875 0.9080 0.9405 9.25e-50 2f0a-a5-m1-cC_2f0a-a5-m1-cA
4 1l6o-a1-m1-cC 87 84 0.9875 0.9080 0.9405 9.25e-50 1l6o-a1-m1-cC_1l6o-a1-m1-cA
5 1l6o-a1-m1-cA 90 84 0.9875 0.8778 0.9405 9.79e-50 1l6o-a1-m1-cB_1l6o-a1-m1-cA, 1l6o-a1-m1-cC_1l6o-a1-m1-cA
6 1l6o-a1-m1-cB 88 84 0.9875 0.8977 0.9405 9.85e-50 1l6o-a1-m1-cB_1l6o-a1-m1-cA
7 2f0a-a5-m1-cC 80 79 0.9750 0.9750 0.9873 1.41e-49 2f0a-a5-m1-cC_2f0a-a5-m1-cA
8 3cby-a1-m1-cB 98 84 0.9625 0.7857 0.9167 4.46e-44 3cby-a1-m1-cB_3cby-a1-m1-cA
9 2rey-a1-m2-cA 91 83 0.9500 0.8352 0.9157 4.70e-44 2rey-a1-m1-cA_2rey-a1-m2-cA
10 2rey-a1-m1-cA 91 83 0.9500 0.8352 0.9157 4.70e-44 2rey-a1-m1-cA_2rey-a1-m2-cA
11 3cbx-a1-m1-cA 105 88 0.9750 0.7429 0.8864 1.67e-42 3cbx-a1-m1-cB_3cbx-a1-m1-cA
12 3cbx-a1-m1-cB 99 84 0.9625 0.7778 0.9167 2.28e-42 3cbx-a1-m1-cB_3cbx-a1-m1-cA
13 3cc0-a1-m1-cA 106 88 0.9750 0.7358 0.8864 3.11e-42 3cc0-a1-m1-cC_3cc0-a1-m1-cA
14 3cby-a1-m1-cA 101 84 0.9500 0.7525 0.9048 2.96e-41 3cby-a1-m1-cB_3cby-a1-m1-cA
15 3cc0-a1-m1-cB 103 86 0.8625 0.6699 0.8023 2.00e-37 3cc0-a1-m1-cC_3cc0-a1-m1-cB
16 3cc0-a1-m1-cC 98 87 0.9000 0.7347 0.8276 2.80e-36 3cc0-a1-m1-cC_3cc0-a1-m1-cA, 3cc0-a1-m1-cC_3cc0-a1-m1-cB
17 3lny-a1-m6-cA 94 78 0.4000 0.3404 0.4103 2.02e-05 3lny-a1-m3-cA_3lny-a1-m6-cA, 3lny-a1-m5-cA_3lny-a1-m6-cA
18 3lny-a1-m5-cA 94 78 0.4000 0.3404 0.4103 2.02e-05 3lny-a1-m5-cA_3lny-a1-m6-cA
19 3lny-a1-m3-cA 94 78 0.4000 0.3404 0.4103 2.02e-05 3lny-a1-m3-cA_3lny-a1-m6-cA
20 7mfw-a2-m1-cA 93 91 0.4625 0.3978 0.4066 2.16e-05 7mfw-a2-m1-cA_7mfw-a2-m2-cB
21 7mfw-a1-m1-cA 93 91 0.4625 0.3978 0.4066 2.16e-05 7mfw-a1-m1-cA_7mfw-a1-m1-cB
22 7mfw-a2-m2-cB 98 91 0.4625 0.3776 0.4066 2.41e-05 7mfw-a2-m1-cA_7mfw-a2-m2-cB
23 7mfw-a1-m1-cB 98 91 0.4625 0.3776 0.4066 2.41e-05 7mfw-a1-m1-cA_7mfw-a1-m1-cB
24 3axa-a2-m3-cB 97 51 0.3250 0.2680 0.5098 8.81e-05 3axa-a2-m1-cB_3axa-a2-m3-cB
25 3axa-a2-m1-cB 97 51 0.3250 0.2680 0.5098 8.81e-05 3axa-a2-m1-cB_3axa-a2-m3-cB
26 7qcr-a1-m1-cB 86 47 0.3000 0.2791 0.5106 2.17e-04 7qcr-a1-m1-cB_7qcr-a1-m1-cA
27 7qcr-a1-m1-cA 87 47 0.3000 0.2759 0.5106 2.59e-04 7qcr-a1-m1-cB_7qcr-a1-m1-cA
28 2xkx-a1-m1-cB 718 65 0.3000 0.0334 0.3692 0.008 2xkx-a1-m1-cB_2xkx-a1-m1-cA
29 2xkx-a1-m1-cB 718 74 0.3125 0.0348 0.3378 0.21 2xkx-a1-m1-cB_2xkx-a1-m1-cA
30 2xkx-a1-m1-cA 721 65 0.3000 0.0333 0.3692 0.008 2xkx-a1-m1-cB_2xkx-a1-m1-cA
31 2xkx-a1-m1-cA 721 74 0.3125 0.0347 0.3378 0.21 2xkx-a1-m1-cB_2xkx-a1-m1-cA
32 4h11-a3-m2-cA 102 74 0.3375 0.2647 0.3649 0.011 4h11-a3-m1-cB_4h11-a3-m2-cA
33 4h11-a3-m1-cB 102 74 0.3375 0.2647 0.3649 0.011 4h11-a3-m1-cB_4h11-a3-m2-cA
34 2wl7-a1-m3-cA 96 74 0.3375 0.2812 0.3649 0.011 2wl7-a1-m2-cA_2wl7-a1-m3-cA
35 2wl7-a1-m2-cA 96 74 0.3375 0.2812 0.3649 0.011 2wl7-a1-m2-cA_2wl7-a1-m3-cA
36 5glj-a1-m1-cD 96 61 0.2500 0.2083 0.3279 0.018 5glj-a1-m1-cA_5glj-a1-m1-cD, 5glj-a1-m1-cB_5glj-a1-m1-cD
37 5glj-a1-m1-cA 96 61 0.2500 0.2083 0.3279 0.018 5glj-a1-m1-cA_5glj-a1-m1-cD, 5glj-a1-m1-cB_5glj-a1-m1-cA
38 5glj-a1-m1-cB 93 61 0.2500 0.2151 0.3279 0.019 5glj-a1-m1-cB_5glj-a1-m1-cA, 5glj-a1-m1-cB_5glj-a1-m1-cD
39 4amh-a1-m1-cB 92 78 0.3375 0.2935 0.3462 0.024 4amh-a1-m1-cB_4amh-a1-m1-cA
40 4amh-a1-m1-cA 94 78 0.3375 0.2872 0.3462 0.027 4amh-a1-m1-cB_4amh-a1-m1-cA
41 2x7z-a1-m2-cA 99 65 0.2875 0.2323 0.3538 0.028 2x7z-a1-m1-cA_2x7z-a1-m2-cA
42 2x7z-a1-m1-cA 99 65 0.2875 0.2323 0.3538 0.028 2x7z-a1-m1-cA_2x7z-a1-m2-cA
43 3rl8-a1-m1-cD 94 65 0.2875 0.2447 0.3538 0.031 3rl8-a1-m1-cD_3rl8-a1-m1-cC, 3rl8-a1-m1-cE_3rl8-a1-m1-cD
44 3rl8-a1-m1-cA 94 65 0.2875 0.2447 0.3538 0.031 3rl8-a1-m1-cA_3rl8-a1-m1-cC, 3rl8-a1-m1-cB_3rl8-a1-m1-cA
45 3rl8-a1-m1-cC 95 65 0.2875 0.2421 0.3538 0.032 3rl8-a1-m1-cA_3rl8-a1-m1-cC, 3rl8-a1-m1-cB_3rl8-a1-m1-cC, 3rl8-a1-m1-cD_3rl8-a1-m1-cC
46 3rl8-a1-m1-cE 90 65 0.2875 0.2556 0.3538 0.039 3rl8-a1-m1-cE_3rl8-a1-m1-cD
47 3rl8-a1-m1-cB 90 65 0.2875 0.2556 0.3538 0.039 3rl8-a1-m1-cB_3rl8-a1-m1-cA, 3rl8-a1-m1-cB_3rl8-a1-m1-cC
48 3zrt-a1-m1-cA 197 65 0.3000 0.1218 0.3692 0.055 3zrt-a1-m1-cC_3zrt-a1-m1-cA
49 3zrt-a1-m1-cA 197 74 0.3125 0.1269 0.3378 1.3 3zrt-a1-m1-cC_3zrt-a1-m1-cA
50 3zrt-a1-m1-cC 188 65 0.3000 0.1277 0.3692 0.067 3zrt-a1-m1-cC_3zrt-a1-m1-cA
51 3zrt-a1-m1-cC 188 74 0.3125 0.1330 0.3378 1.4 3zrt-a1-m1-cC_3zrt-a1-m1-cA
52 3b76-a1-m1-cA 101 45 0.2375 0.1881 0.4222 0.17 3b76-a1-m1-cA_3b76-a1-m1-cB
53 3b76-a1-m1-cB 102 45 0.2375 0.1863 0.4222 0.17 3b76-a1-m1-cA_3b76-a1-m1-cB
54 4q2q-a1-m2-cA 90 58 0.2250 0.2000 0.3103 0.34 4q2q-a1-m1-cA_4q2q-a1-m2-cA
55 4q2q-a1-m1-cA 90 58 0.2250 0.2000 0.3103 0.34 4q2q-a1-m1-cA_4q2q-a1-m2-cA
56 3tsw-a5-m1-cB 194 58 0.2250 0.0928 0.3103 0.38 3tsw-a5-m1-cB_3tsw-a5-m1-cD
57 3tsw-a5-m1-cD 199 58 0.2250 0.0905 0.3103 0.43 3tsw-a5-m1-cB_3tsw-a5-m1-cD
58 5ocs-a3-m3-cD 371 59 0.2500 0.0539 0.3390 0.55 5ocs-a3-m1-cC_5ocs-a3-m3-cD
59 5ocs-a3-m1-cC 369 59 0.2500 0.0542 0.3390 0.62 5ocs-a3-m1-cC_5ocs-a3-m3-cD
60 7qsb-a1-m1-cB 80 55 0.2375 0.2375 0.3455 2.1 7qsb-a1-m1-cB_7qsb-a1-m1-cA
61 2i1n-a4-m3-cA 101 74 0.3125 0.2475 0.3378 2.2 2i1n-a4-m3-cA_2i1n-a4-m3-cB
62 2i1n-a4-m1-cA 101 74 0.3125 0.2475 0.3378 2.2 2i1n-a4-m1-cA_2i1n-a4-m3-cB
63 2i1n-a3-m1-cA 101 74 0.3125 0.2475 0.3378 2.2 2i1n-a3-m1-cA_2i1n-a3-m2-cB
64 2i1n-a4-m3-cB 102 74 0.3125 0.2451 0.3378 2.3 2i1n-a4-m1-cA_2i1n-a4-m3-cB, 2i1n-a4-m1-cB_2i1n-a4-m3-cB, 2i1n-a4-m3-cA_2i1n-a4-m3-cB
65 2i1n-a4-m1-cB 102 74 0.3125 0.2451 0.3378 2.3 2i1n-a4-m1-cB_2i1n-a4-m3-cB
66 2i1n-a3-m2-cB 102 74 0.3125 0.2451 0.3378 2.3 2i1n-a3-m1-cA_2i1n-a3-m2-cB
67 2zpl-a4-m1-cC 88 41 0.1875 0.1705 0.3659 2.5 2zpl-a4-m1-cC_2zpl-a4-m1-cB
68 2zpl-a4-m1-cA 91 41 0.1875 0.1648 0.3659 3.2 2zpl-a4-m1-cA_2zpl-a4-m1-cB
69 2zpl-a4-m1-cB 93 41 0.1875 0.1613 0.3659 3.2 2zpl-a4-m1-cA_2zpl-a4-m1-cB, 2zpl-a4-m1-cC_2zpl-a4-m1-cB
70 6mso-a2-m1-cC 528 34 0.1750 0.0265 0.4118 4.8 6mso-a2-m1-cC_6mso-a2-m1-cD
71 6mso-a2-m1-cD 531 34 0.1750 0.0264 0.4118 4.8 6mso-a2-m1-cC_6mso-a2-m1-cD
72 3nek-a1-m1-cA 215 57 0.2625 0.0977 0.3684 6.1 3nek-a1-m1-cA_3nek-a1-m1-cB
73 3nek-a1-m1-cB 216 57 0.2625 0.0972 0.3684 6.2 3nek-a1-m1-cA_3nek-a1-m1-cB
74 4xxv-a1-m1-cA 356 27 0.1625 0.0365 0.4815 9.4 4xxv-a1-m1-cB_4xxv-a1-m1-cA
75 4xxv-a1-m1-cB 355 27 0.1625 0.0366 0.4815 9.8 4xxv-a1-m1-cB_4xxv-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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