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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=84)
TVTVYTKPACVQCSATSKALDKQGIAYQKVDISLDSEARDYVMALGYLQAPVVVAGNDHW
SGFRPDRIKALAGAALTAHHHHHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4k8m-a1-m2-cA 84 84 1.0000 1.0000 1.0000 9.07e-59 4k8m-a1-m1-cA_4k8m-a1-m2-cA
2 4k8m-a1-m1-cA 84 84 1.0000 1.0000 1.0000 9.07e-59 4k8m-a1-m1-cA_4k8m-a1-m2-cA
3 1r7h-a1-m1-cB 74 71 0.6190 0.7027 0.7324 1.23e-36 1r7h-a1-m1-cA_1r7h-a1-m1-cB
4 1r7h-a1-m1-cA 74 71 0.6190 0.7027 0.7324 1.23e-36 1r7h-a1-m1-cA_1r7h-a1-m1-cB
5 7c12-a1-m1-cD 73 72 0.2381 0.2740 0.2778 7.25e-06 7c12-a1-m1-cA_7c12-a1-m1-cD, 7c12-a1-m1-cB_7c12-a1-m1-cD
6 7c12-a1-m1-cB 73 72 0.2381 0.2740 0.2778 7.25e-06 7c12-a1-m1-cB_7c12-a1-m1-cD
7 7c12-a1-m1-cA 73 72 0.2381 0.2740 0.2778 7.25e-06 7c12-a1-m1-cA_7c12-a1-m1-cD
8 7c13-a1-m2-cC 71 70 0.2262 0.2676 0.2714 5.17e-05 7c13-a1-m1-cB_7c13-a1-m2-cC, 7c13-a1-m2-cB_7c13-a1-m2-cC
9 7c13-a1-m2-cB 71 70 0.2262 0.2676 0.2714 5.17e-05 7c13-a1-m1-cB_7c13-a1-m2-cB, 7c13-a1-m2-cB_7c13-a1-m2-cC
10 7c13-a1-m1-cB 71 70 0.2262 0.2676 0.2714 5.17e-05 7c13-a1-m1-cB_7c13-a1-m2-cB, 7c13-a1-m1-cB_7c13-a1-m2-cC
11 3zit-a1-m1-cA 74 71 0.2143 0.2432 0.2535 1.85e-04 3zit-a1-m1-cA_3zit-a1-m1-cB
12 3zit-a1-m1-cB 78 71 0.2143 0.2308 0.2535 1.92e-04 3zit-a1-m1-cA_3zit-a1-m1-cB
13 1t1v-a1-m1-cB 93 54 0.2738 0.2473 0.4259 0.007 1t1v-a1-m1-cA_1t1v-a1-m1-cB
14 1t1v-a1-m1-cA 93 54 0.2738 0.2473 0.4259 0.007 1t1v-a1-m1-cA_1t1v-a1-m1-cB
15 1nm3-a1-m2-cB 232 62 0.1667 0.0603 0.2258 0.009 1nm3-a1-m1-cA_1nm3-a1-m2-cB, 1nm3-a1-m2-cA_1nm3-a1-m2-cB
16 1nm3-a1-m2-cA 230 62 0.1667 0.0609 0.2258 0.009 1nm3-a1-m2-cA_1nm3-a1-m2-cB
17 1nm3-a1-m1-cA 230 62 0.1667 0.0609 0.2258 0.009 1nm3-a1-m1-cA_1nm3-a1-m2-cB
18 2mzc-a1-m1-cB 92 62 0.2024 0.1848 0.2742 0.014 2mzc-a1-m1-cA_2mzc-a1-m1-cB
19 2mzc-a1-m1-cA 92 62 0.2024 0.1848 0.2742 0.014 2mzc-a1-m1-cA_2mzc-a1-m1-cB
20 1lj9-a1-m1-cA 144 42 0.1667 0.0972 0.3333 3.7 1lj9-a1-m1-cB_1lj9-a1-m1-cA
21 1lj9-a1-m1-cB 142 42 0.1667 0.0986 0.3333 3.8 1lj9-a1-m1-cB_1lj9-a1-m1-cA
22 1z9h-a3-m2-cD 274 54 0.1786 0.0547 0.2778 4.6 1z9h-a3-m2-cA_1z9h-a3-m2-cD, 1z9h-a3-m2-cC_1z9h-a3-m2-cD
23 1z9h-a3-m2-cC 274 54 0.1786 0.0547 0.2778 4.6 1z9h-a3-m2-cC_1z9h-a3-m2-cD
24 1z9h-a3-m2-cA 274 54 0.1786 0.0547 0.2778 4.6 1z9h-a3-m2-cA_1z9h-a3-m2-cD
25 5ufh-a1-m2-cA 267 71 0.2976 0.0936 0.3521 6.1 5ufh-a1-m1-cA_5ufh-a1-m2-cA
26 5ufh-a1-m1-cA 267 71 0.2976 0.0936 0.3521 6.1 5ufh-a1-m1-cA_5ufh-a1-m2-cA
27 6f97-a1-m1-cB 487 54 0.1310 0.0226 0.2037 7.6 6f97-a1-m1-cB_6f97-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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