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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=54)
TVVLTVTGEPCHFPFQYHRQLYHKCTHKGRPGPQPWCATTPNFDQDQRWGYCLE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7prk-a1-m2-cA 54 54 1.0000 1.0000 1.0000 9.07e-37 7prk-a1-m1-cA_7prk-a1-m2-cA
2 7prk-a1-m1-cA 54 54 1.0000 1.0000 1.0000 9.07e-37 7prk-a1-m1-cA_7prk-a1-m2-cA
3 1eak-a2-m1-cD 419 52 0.4444 0.0573 0.4615 7.63e-12 1eak-a2-m1-cB_1eak-a2-m1-cD
4 1eak-a2-m1-cD 419 54 0.3889 0.0501 0.3889 3.98e-10 1eak-a2-m1-cB_1eak-a2-m1-cD
5 1eak-a2-m1-cD 419 48 0.3704 0.0477 0.4167 6.18e-09 1eak-a2-m1-cB_1eak-a2-m1-cD
6 1eak-a2-m1-cB 419 52 0.4444 0.0573 0.4615 7.63e-12 1eak-a2-m1-cB_1eak-a2-m1-cD
7 1eak-a2-m1-cB 419 54 0.3889 0.0501 0.3889 3.98e-10 1eak-a2-m1-cB_1eak-a2-m1-cD
8 1eak-a2-m1-cB 419 48 0.3704 0.0477 0.4167 6.18e-09 1eak-a2-m1-cB_1eak-a2-m1-cD
9 3m7p-a1-m2-cA 301 46 0.4074 0.0731 0.4783 2.59e-10 3m7p-a1-m1-cA_3m7p-a1-m2-cA
10 3m7p-a1-m2-cA 301 48 0.3704 0.0664 0.4167 5.78e-10 3m7p-a1-m1-cA_3m7p-a1-m2-cA
11 3m7p-a1-m1-cA 301 46 0.4074 0.0731 0.4783 2.59e-10 3m7p-a1-m1-cA_3m7p-a1-m2-cA
12 3m7p-a1-m1-cA 301 48 0.3704 0.0664 0.4167 5.78e-10 3m7p-a1-m1-cA_3m7p-a1-m2-cA
13 7jpu-a1-m1-cC 1156 51 0.4074 0.0190 0.4314 2.32e-07 7jpu-a1-m1-cD_7jpu-a1-m1-cC
14 7jpu-a1-m1-cA 1156 51 0.4074 0.0190 0.4314 2.32e-07 7jpu-a1-m1-cD_7jpu-a1-m1-cA
15 7jpu-a1-m1-cD 1155 51 0.4074 0.0190 0.4314 2.34e-07 7jpu-a1-m1-cD_7jpu-a1-m1-cA, 7jpu-a1-m1-cD_7jpu-a1-m1-cC
16 1h8p-a1-m2-cB 88 42 0.3333 0.2045 0.4286 3.08e-06 1h8p-a1-m1-cA_1h8p-a1-m2-cB, 1h8p-a1-m2-cA_1h8p-a1-m2-cB
17 1h8p-a1-m2-cB 88 46 0.3148 0.1932 0.3696 0.14 1h8p-a1-m1-cA_1h8p-a1-m2-cB, 1h8p-a1-m2-cA_1h8p-a1-m2-cB
18 1h8p-a1-m2-cA 88 42 0.3333 0.2045 0.4286 3.08e-06 1h8p-a1-m2-cA_1h8p-a1-m2-cB
19 1h8p-a1-m2-cA 88 46 0.3148 0.1932 0.3696 0.14 1h8p-a1-m2-cA_1h8p-a1-m2-cB
20 1h8p-a1-m1-cA 88 42 0.3333 0.2045 0.4286 3.08e-06 1h8p-a1-m1-cA_1h8p-a1-m2-cB
21 1h8p-a1-m1-cA 88 46 0.3148 0.1932 0.3696 0.14 1h8p-a1-m1-cA_1h8p-a1-m2-cB
22 5mux-a3-m1-cF 468 15 0.1296 0.0150 0.4667 2.0 5mux-a3-m1-cF_5mux-a3-m1-cE
23 5mux-a3-m1-cE 472 15 0.1296 0.0148 0.4667 2.1 5mux-a3-m1-cF_5mux-a3-m1-cE
24 8i0n-a1-m1-cB 362 14 0.1667 0.0249 0.6429 9.3 8i0n-a1-m1-cA_8i0n-a1-m1-cB
25 8i0n-a1-m1-cA 362 14 0.1667 0.0249 0.6429 9.3 8i0n-a1-m1-cA_8i0n-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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