HomodimerDB

Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB

>protein (length=98)
TYCPARGDVILLDKRPALVVSDDLFNQVTGFAVVCPITNQIKGYPFEVPVDGTTKTTGVI
LADQVKSLDWKARAARTVDSVSGETVTTVVDMVSKIIK

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Dimers
1	7bye-a2-m1-cF	98	98	1.0000	1.0000	1.0000	3.98e-67	7bye-a2-m1-cF_7bye-a2-m1-cE
2	7bye-a2-m1-cE	100	100	1.0000	0.9800	0.9800	4.98e-65	7bye-a2-m1-cF_7bye-a2-m1-cE
3	7d2n-a1-m1-cC	100	96	0.3673	0.3600	0.3750	9.09e-23	7d2n-a1-m1-cC_7d2n-a1-m1-cB
4	7d2q-a1-m1-cA	100	96	0.3673	0.3600	0.3750	7.15e-22	7d2q-a1-m1-cA_7d2q-a1-m1-cG
5	3nfc-a2-m1-cB	92	96	0.4184	0.4457	0.4271	7.11e-20	3nfc-a2-m1-cB_3nfc-a2-m1-cC
6	7d2n-a1-m1-cB	108	104	0.3673	0.3333	0.3462	1.00e-19	7d2n-a1-m1-cC_7d2n-a1-m1-cB
7	7d2q-a1-m1-cG	110	107	0.3673	0.3273	0.3364	2.52e-19	7d2q-a1-m1-cA_7d2q-a1-m1-cG
8	7d2p-a1-m1-cB	111	107	0.3673	0.3243	0.3364	2.53e-19	7d2p-a1-m1-cA_7d2p-a1-m1-cB
9	7d2p-a1-m1-cA	111	107	0.3673	0.3243	0.3364	2.53e-19	7d2p-a1-m1-cA_7d2p-a1-m1-cB
10	3nfc-a2-m1-cC	93	97	0.4184	0.4409	0.4227	1.51e-18	3nfc-a2-m1-cB_3nfc-a2-m1-cC
11	1m1f-a1-m1-cB	105	84	0.3163	0.2952	0.3690	7.85e-11	1m1f-a1-m1-cB_1m1f-a1-m1-cA
12	1m1f-a1-m1-cA	107	84	0.3061	0.2804	0.3571	1.10e-10	1m1f-a1-m1-cB_1m1f-a1-m1-cA
13	4me7-a1-m1-cD	100	71	0.2551	0.2500	0.3521	1.89e-06	4me7-a1-m1-cD_4me7-a1-m1-cC
14	6kyt-a1-m1-cK	117	76	0.2857	0.2393	0.3684	5.26e-04	6kyt-a1-m1-cJ_6kyt-a1-m1-cK
15	6kyt-a1-m1-cJ	111	76	0.2857	0.2523	0.3684	7.83e-04	6kyt-a1-m1-cJ_6kyt-a1-m1-cK
16	4me7-a1-m1-cC	107	78	0.2551	0.2336	0.3205	8.22e-04	4me7-a1-m1-cD_4me7-a1-m1-cC
17	7ewj-a2-m1-cD	110	86	0.2551	0.2273	0.2907	8.66e-04	7ewj-a2-m1-cD_7ewj-a2-m1-cE
18	7ewj-a2-m1-cE	113	86	0.2551	0.2212	0.2907	8.84e-04	7ewj-a2-m1-cD_7ewj-a2-m1-cE
19	6l29-a1-m1-cB	119	67	0.2551	0.2101	0.3731	0.002	6l29-a1-m1-cB_6l29-a1-m1-cA
20	6l29-a1-m1-cA	121	67	0.2551	0.2066	0.3731	0.002	6l29-a1-m1-cB_6l29-a1-m1-cA
21	1ne8-a1-m2-cA	116	80	0.2449	0.2069	0.3000	0.003	1ne8-a1-m1-cA_1ne8-a1-m2-cA
22	1ne8-a1-m1-cA	116	80	0.2449	0.2069	0.3000	0.003	1ne8-a1-m1-cA_1ne8-a1-m2-cA
23	7ezx-a1-m1-cdD	297	42	0.1327	0.0438	0.3095	1.5	7ezx-a1-m1-cd4_7ezx-a1-m1-cdD
24	7ezx-a1-m1-cd4	297	42	0.1327	0.0438	0.3095	1.5	7ezx-a1-m1-cd4_7ezx-a1-m1-cdD
25	7k3z-a1-m1-cB	560	39	0.1122	0.0196	0.2821	4.0	7k3z-a1-m1-cB_7k3z-a1-m1-cC
26	4wwu-a2-m1-cH	363	39	0.1224	0.0331	0.3077	7.5	4wwu-a2-m1-cE_4wwu-a2-m1-cH
27	4wwu-a2-m1-cE	349	39	0.1224	0.0344	0.3077	7.9	4wwu-a2-m1-cE_4wwu-a2-m1-cH
28	2gf6-a1-m2-cB	131	46	0.1122	0.0840	0.2391	8.2	2gf6-a1-m2-cA_2gf6-a1-m2-cB
29	2gf6-a1-m2-cA	131	46	0.1122	0.0840	0.2391	8.2	2gf6-a1-m2-cA_2gf6-a1-m2-cB

[Back]

Reference:
Jacob Schwartz et al.