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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=48)
TYSSRTADKFVVRLPEGREQIAEVARSHHRSNSEIIARLEQSLLQEGA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3qoq-a1-m1-cA 48 48 1.0000 1.0000 1.0000 2.63e-29 3qoq-a1-m1-cB_3qoq-a1-m1-cA, 3qoq-a1-m1-cC_3qoq-a1-m1-cA
2 3qoq-a1-m1-cC 47 47 0.9792 1.0000 1.0000 1.20e-28 3qoq-a1-m1-cC_3qoq-a1-m1-cA
3 3qoq-a1-m1-cB 42 42 0.8750 1.0000 1.0000 1.86e-24 3qoq-a1-m1-cB_3qoq-a1-m1-cA
4 1uly-a1-m2-cA 185 38 0.3125 0.0811 0.3947 0.008 1uly-a1-m1-cA_1uly-a1-m2-cA
5 1uly-a1-m1-cA 185 38 0.3125 0.0811 0.3947 0.008 1uly-a1-m1-cA_1uly-a1-m2-cA
6 1v4v-a1-m1-cB 363 31 0.2500 0.0331 0.3871 0.52 1v4v-a1-m1-cB_1v4v-a1-m1-cA
7 1v4v-a1-m1-cA 364 31 0.2500 0.0330 0.3871 0.52 1v4v-a1-m1-cB_1v4v-a1-m1-cA
8 2ymz-a3-m1-cE 130 13 0.1667 0.0615 0.6154 2.3 2ymz-a3-m1-cD_2ymz-a3-m1-cE
9 2ymz-a3-m1-cD 130 13 0.1667 0.0615 0.6154 2.3 2ymz-a3-m1-cD_2ymz-a3-m1-cE
10 1uru-a1-m2-cA 215 24 0.2083 0.0465 0.4167 3.5 1uru-a1-m1-cA_1uru-a1-m2-cA
11 1uru-a1-m1-cA 215 24 0.2083 0.0465 0.4167 3.5 1uru-a1-m1-cA_1uru-a1-m2-cA
12 5lzq-a1-m1-cB 725 24 0.2292 0.0152 0.4583 9.2 5lzq-a1-m1-cA_5lzq-a1-m1-cB
13 5lzq-a1-m1-cA 725 24 0.2292 0.0152 0.4583 9.2 5lzq-a1-m1-cA_5lzq-a1-m1-cB
14 7co5-a1-m1-cL 325 30 0.2083 0.0308 0.3333 9.3 7co5-a1-m1-cF_7co5-a1-m1-cL
15 7co5-a1-m1-cH 325 30 0.2083 0.0308 0.3333 9.3 7co5-a1-m1-cF_7co5-a1-m1-cH
16 7co5-a1-m1-cF 325 30 0.2083 0.0308 0.3333 9.3 7co5-a1-m1-cF_7co5-a1-m1-cH, 7co5-a1-m1-cF_7co5-a1-m1-cL
17 7co3-a1-m3-cA 301 30 0.2083 0.0332 0.3333 9.7 7co3-a1-m2-cA_7co3-a1-m3-cA
18 7co3-a1-m2-cA 301 30 0.2083 0.0332 0.3333 9.7 7co3-a1-m2-cA_7co3-a1-m3-cA

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Reference:
Jacob Schwartz et al.

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