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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=91)
TYTKVQKTGSVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESDVL
LVGDDPWEEFVGCVRCIRILSPTEVQQMSEE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4chk-a6-m4-cB 91 91 1.0000 1.0000 1.0000 1.12e-63 4chk-a6-m1-cG_4chk-a6-m4-cB
2 4chk-a6-m1-cG 88 90 0.9560 0.9886 0.9667 9.65e-59 4chk-a6-m1-cG_4chk-a6-m4-cB
3 3tqp-a1-m1-cA 411 33 0.1429 0.0316 0.3939 3.0 3tqp-a1-m1-cB_3tqp-a1-m1-cA
4 3tqp-a1-m1-cB 397 33 0.1429 0.0327 0.3939 3.2 3tqp-a1-m1-cB_3tqp-a1-m1-cA
5 3m6s-a1-m1-cC 323 29 0.1099 0.0310 0.3448 4.7 3m6s-a1-m1-cC_3m6s-a1-m1-cA
6 3m6s-a1-m1-cA 325 29 0.1099 0.0308 0.3448 4.7 3m6s-a1-m1-cC_3m6s-a1-m1-cA
7 3gei-a2-m1-cB 424 37 0.1319 0.0283 0.3243 6.9 3gei-a2-m1-cC_3gei-a2-m1-cB

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Reference:
Jacob Schwartz et al.

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