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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
TYTPEEYLKNYALSVCIAEGYSAKEVKNDAAAAARGYTEFGDYSLEAHTAVRALAKEFLA
KPYDSMSGEPMTMAKCIDLVHSQELQAIIKKYQGKD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3zib-a2-m1-cD 96 96 1.0000 1.0000 1.0000 8.25e-68 3zib-a2-m1-cC_3zib-a2-m1-cD
2 3zib-a2-m1-cC 96 96 0.9896 0.9896 0.9896 5.68e-65 3zib-a2-m1-cC_3zib-a2-m1-cD
3 4j30-a1-m2-cB 100 91 0.3958 0.3800 0.4176 2.22e-16 4j30-a1-m1-cB_4j30-a1-m2-cB
4 4j30-a1-m1-cB 100 91 0.3958 0.3800 0.4176 2.22e-16 4j30-a1-m1-cB_4j30-a1-m2-cB
5 4b6i-a2-m1-cC 102 91 0.2500 0.2353 0.2637 0.002 4b6i-a2-m1-cB_4b6i-a2-m1-cC
6 4b6i-a2-m1-cB 100 91 0.2500 0.2400 0.2637 0.002 4b6i-a2-m1-cB_4b6i-a2-m1-cC
7 4frw-a2-m1-cC 211 78 0.2396 0.1090 0.2949 0.30 4frw-a2-m1-cC_4frw-a2-m1-cB
8 4frw-a2-m1-cB 213 78 0.2396 0.1080 0.2949 0.30 4frw-a2-m1-cC_4frw-a2-m1-cB
9 6v8i-a1-m1-cCE 387 75 0.2188 0.0543 0.2800 0.80 6v8i-a1-m1-cBE_6v8i-a1-m1-cCE
10 6v8i-a1-m1-cBE 387 75 0.2188 0.0543 0.2800 0.80 6v8i-a1-m1-cBE_6v8i-a1-m1-cCE
11 7mrj-a1-m1-cA 85 33 0.1042 0.1176 0.3030 7.3 7mrj-a1-m1-cB_7mrj-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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