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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=58)
VACTLAALILHDDGIPITSEKIATVVKAAGIKVEAYWPALFAKLLEKRSVDDLILSVG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4v7e-a1-m1-cCv 58 58 1.0000 1.0000 1.0000 8.32e-36 4v7e-a1-m1-cCu_4v7e-a1-m1-cCv
2 4v7e-a1-m1-cCu 58 58 1.0000 1.0000 1.0000 8.32e-36 4v7e-a1-m1-cCu_4v7e-a1-m1-cCv
3 5dgf-a2-m1-cp1 47 42 0.3621 0.4468 0.5000 9.06e-07 5dgf-a2-m1-cp2_5dgf-a2-m1-cp1
4 5dgf-a2-m1-cp2 46 41 0.3448 0.4348 0.4878 5.35e-06 5dgf-a2-m1-cp2_5dgf-a2-m1-cp1
5 3a1y-a1-m1-cF 58 50 0.3621 0.3621 0.4200 0.018 3a1y-a1-m1-cE_3a1y-a1-m1-cF
6 3a1y-a1-m1-cE 58 50 0.3621 0.3621 0.4200 0.018 3a1y-a1-m1-cD_3a1y-a1-m1-cE, 3a1y-a1-m1-cE_3a1y-a1-m1-cF
7 3a1y-a1-m1-cD 58 50 0.3621 0.3621 0.4200 0.018 3a1y-a1-m1-cD_3a1y-a1-m1-cE
8 4yxb-a1-m1-cA 157 44 0.2069 0.0764 0.2727 1.1 4yxb-a1-m1-cA_4yxb-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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