Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=44)
VATRDNCCILDERFGSYCPTTCGIADFLSTYQTKVDKDLQSLED

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2a45-a1-m1-cL 44 44 1.0000 1.0000 1.0000 2.11e-27 2a45-a1-m1-cI_2a45-a1-m1-cL
2 3ghg-a2-m1-cI 394 44 1.0000 0.1117 1.0000 1.05e-25 3ghg-a2-m1-cL_3ghg-a2-m1-cI
3 2a45-a1-m1-cI 40 40 0.9091 1.0000 1.0000 2.39e-24 2a45-a1-m1-cI_2a45-a1-m1-cL
4 3ghg-a2-m1-cL 391 41 0.9318 0.1049 1.0000 8.41e-24 3ghg-a2-m1-cL_3ghg-a2-m1-cI
5 1jy2-a1-m1-cS 47 43 0.8636 0.8085 0.8837 9.98e-24 1jy2-a1-m1-cP_1jy2-a1-m1-cS
6 1jy2-a1-m1-cP 44 40 0.7955 0.7955 0.8750 1.24e-21 1jy2-a1-m1-cP_1jy2-a1-m1-cS
7 1m1j-a1-m1-cC 390 41 0.6364 0.0718 0.6829 4.00e-15 1m1j-a1-m1-cF_1m1j-a1-m1-cC
8 1m1j-a1-m1-cF 389 40 0.6136 0.0694 0.6750 1.50e-14 1m1j-a1-m1-cF_1m1j-a1-m1-cC
9 1otk-a1-m1-cB 244 14 0.1591 0.0287 0.5000 2.0 1otk-a1-m1-cA_1otk-a1-m1-cB
10 1otk-a1-m1-cA 244 14 0.1591 0.0287 0.5000 2.0 1otk-a1-m1-cA_1otk-a1-m1-cB
11 3pvt-a1-m2-cC 248 14 0.1591 0.0282 0.5000 2.0 3pvt-a1-m1-cC_3pvt-a1-m2-cC
12 3pvt-a1-m1-cC 248 14 0.1591 0.0282 0.5000 2.0 3pvt-a1-m1-cC_3pvt-a1-m2-cC
13 5zvt-a1-m9-cT 604 29 0.2500 0.0182 0.3793 9.7 5zvt-a1-m9-cR_5zvt-a1-m9-cT
14 5zvt-a1-m9-cR 604 29 0.2500 0.0182 0.3793 9.7 5zvt-a1-m9-cR_5zvt-a1-m9-cT
15 5zvt-a1-m9-cN 604 29 0.2500 0.0182 0.3793 9.7 5zvt-a1-m9-cF_5zvt-a1-m9-cN
16 5zvt-a1-m9-cL 604 29 0.2500 0.0182 0.3793 9.7 5zvt-a1-m9-cD_5zvt-a1-m9-cL
17 5zvt-a1-m9-cF 604 29 0.2500 0.0182 0.3793 9.7 5zvt-a1-m9-cF_5zvt-a1-m9-cN
18 5zvt-a1-m9-cD 604 29 0.2500 0.0182 0.3793 9.7 5zvt-a1-m9-cD_5zvt-a1-m9-cL

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600