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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=61)
VDAENQVELEEKTRLINQVMELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSA
S

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4bwd-a2-m2-cC 61 61 1.0000 1.0000 1.0000 1.29e-37 4bwd-a2-m1-cC_4bwd-a2-m2-cC
2 4bwd-a2-m1-cC 61 61 1.0000 1.0000 1.0000 1.29e-37 4bwd-a2-m1-cC_4bwd-a2-m2-cC
3 3cqy-a3-m2-cA 364 48 0.2623 0.0440 0.3333 3.0 3cqy-a3-m2-cB_3cqy-a3-m2-cA
4 3cqy-a3-m1-cA 364 48 0.2623 0.0440 0.3333 3.0 3cqy-a3-m2-cB_3cqy-a3-m1-cA
5 3cqy-a3-m2-cB 363 48 0.2623 0.0441 0.3333 3.2 3cqy-a3-m2-cB_3cqy-a3-m1-cA, 3cqy-a3-m2-cB_3cqy-a3-m2-cA
6 3mqc-a2-m2-cD 97 52 0.3115 0.1959 0.3654 4.4 3mqc-a2-m1-cA_3mqc-a2-m2-cD, 3mqc-a2-m1-cC_3mqc-a2-m2-cD, 3mqc-a2-m2-cB_3mqc-a2-m2-cD
7 3mqc-a2-m2-cB 97 52 0.3115 0.1959 0.3654 4.4 3mqc-a2-m2-cB_3mqc-a2-m2-cD
8 3mqc-a2-m1-cC 97 52 0.3115 0.1959 0.3654 4.4 3mqc-a2-m1-cA_3mqc-a2-m1-cC, 3mqc-a2-m1-cC_3mqc-a2-m2-cD
9 3mqc-a2-m1-cA 97 52 0.3115 0.1959 0.3654 4.4 3mqc-a2-m1-cA_3mqc-a2-m1-cC, 3mqc-a2-m1-cA_3mqc-a2-m2-cD
10 3mqb-a2-m3-cA 109 48 0.2951 0.1651 0.3750 4.9 3mqb-a2-m3-cB_3mqb-a2-m3-cA
11 3mqb-a2-m1-cA 109 48 0.2951 0.1651 0.3750 4.9 3mqb-a2-m3-cB_3mqb-a2-m1-cA
12 3mqb-a1-m1-cA 109 48 0.2951 0.1651 0.3750 4.9 3mqb-a1-m2-cE_3mqb-a1-m1-cA, 3mqb-a1-m2-cF_3mqb-a1-m1-cA
13 3mqb-a3-m4-cF 102 52 0.3115 0.1863 0.3654 5.0 3mqb-a3-m4-cF_3mqb-a3-m1-cE
14 3mqb-a1-m2-cF 102 52 0.3115 0.1863 0.3654 5.0 3mqb-a1-m2-cF_3mqb-a1-m1-cA
15 3mqb-a3-m1-cE 106 48 0.2951 0.1698 0.3750 5.2 3mqb-a3-m4-cF_3mqb-a3-m1-cE
16 3mqb-a2-m3-cB 106 48 0.2951 0.1698 0.3750 5.2 3mqb-a2-m3-cB_3mqb-a2-m1-cA, 3mqb-a2-m3-cB_3mqb-a2-m3-cA
17 3mqb-a1-m2-cE 106 48 0.2951 0.1698 0.3750 5.2 3mqb-a1-m1-cB_3mqb-a1-m2-cE, 3mqb-a1-m2-cE_3mqb-a1-m1-cA
18 3mqb-a1-m1-cB 106 48 0.2951 0.1698 0.3750 5.2 3mqb-a1-m1-cB_3mqb-a1-m2-cE

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Reference:
Jacob Schwartz et al.

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